RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 BLMHQ13867 455 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 SLMAPQ14BN4 828 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 EMC10Q5UCC4 262 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 SPECC1LQ69YQ0 1117 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 ADALQ6DHV7 355 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 NAA16Q6N069 864 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 Q6ZUG5 572 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 RASGRP2Q7LDG7 609 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 UBE3BQ7Z3V4 1068 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 NLRP14Q86W24 1093 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 NUP133Q8WUM0 1156 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 CUL5Q93034 780 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 TCEANC2Q96MN5 208 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 ZNF396Q96N95 335 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 PANX2Q96RD6 677 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 IL1RAPL2Q9NP60 686 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 RBM8AQ9Y5S9 174 aaKnown RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 MYH13Q9UKX3 1938 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 CLTCQ00610 1675 aaKnown RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 ATP7BP35670 1465 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 BUB1BO60566 1050 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 DNAJC8O75937 253 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 GNAT1P11488 350 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 CCT4P50991 539 aaKnown RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 ELF3P78545 371 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 LACTB2Q53H82 288 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 CRELD2Q6UXH1 353 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 CCDC121Q6ZUS5 278 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 TRAPPC11Q7Z392 1133 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 TAX1BP1Q86VP1 789 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 CCT8L2Q96SF2 557 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 SENP2Q9HC62 589 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 HOOK1Q9UJC3 728 aaKnown RBP10.75□□□□□ -0.69
SIX4-202ENST00000554079 TUBE1Q9UJT0 475 aa10.75□□□□□ -0.69
SIX4-202ENST00000554079 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.75□□□□□ -0.69
SIX4-202ENST00000554079 SLC27A2O14975 620 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 FAM107AO95990 144 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 PSMA5P28066 241 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 BLOC1S2Q6QNY1 142 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 MYLK4Q86YV6 388 aaPredicted RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 AFAP1Q8N556 730 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 RUFY2Q8WXA3 655 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 RNPC3Q96LT9 517 aaKnown RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 PAPOLBQ9NRJ5 636 aaKnown RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 FAM184BQ9ULE4 1060 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 ABCC1P33527 1531 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 USP42Q9H9J4 1324 aaKnown RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 PDLIM1O00151 329 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 ZMYND10O75800 440 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 PPP1R37O75864 691 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 FMNL1O95466 1100 aaPredicted RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 ABL1P00519 1130 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 MYL1P05976 194 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 CDC25CP30307 473 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 ALDH1B1P30837 517 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 SCTRP47872 440 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 G3BP1Q13283 466 aaKnown RBP eCLIP10.74□□□□□ -0.69
SIX4-202ENST00000554079 GALNT15Q8N3T1 639 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 CNKSR1Q969H4 720 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 RRP36Q96EU6 259 aaKnown RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 RBM41Q96IZ5 413 aaKnown RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 L3MBTL3Q96JM7 780 aaPredicted RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 GORASP1Q9BQQ3 440 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 NAA15Q9BXJ9 866 aaKnown RBP10.74□□□□□ -0.69
SIX4-202ENST00000554079 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 MYO1AQ9UBC5 1043 aa10.74□□□□□ -0.69
SIX4-202ENST00000554079 ANP32DO95626 131 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 A1BGP04217 495 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 TPP2P29144 1249 aaPredicted RBP10.73□□□□□ -0.69
SIX4-202ENST00000554079 ATP1A2P50993 1020 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 POLA2Q14181 598 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 NUTM2GQ5VZR2 741 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 TBC1D31Q96DN5 1066 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
SIX4-202ENST00000554079 MMS19Q96T76 1030 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 MAF1Q9H063 256 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 C19orf44Q9H6X5 657 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 SLC5A4Q9NY91 659 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 TTF2Q9UNY4 1162 aaKnown RBP10.73□□□□□ -0.69
SIX4-202ENST00000554079 ARHGEF10O15013 1369 aa10.73□□□□□ -0.69
SIX4-202ENST00000554079 FYB1O15117 783 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 FECHP22830 423 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 ABL2P42684 1182 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 SEC24CP53992 1094 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 GUCY1A3Q02108 690 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 NBPF14Q5TI25 921 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 SDCCAG8Q86SQ7 713 aaPredicted RBP10.72□□□□□ -0.69
SIX4-202ENST00000554079 SH2D3CQ8N5H7 860 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 MAP4K1Q92918 833 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 CYFIP2Q96F07 1278 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 TSC22D3Q99576 134 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 TAF6LQ9Y6J9 622 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 SBNO1A3KN83 1393 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 ZFYVE16Q7Z3T8 1539 aa10.72□□□□□ -0.69
SIX4-202ENST00000554079 A0A1B0GVG6 124 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms