RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZNF384Q8TF68 577 aa10.82□□□□□ -0.68
TDP1-208ENST00000553989 SNRKQ9NRH2 765 aa10.82□□□□□ -0.68
TDP1-208ENST00000553989 PHIPQ8WWQ0 1821 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 CEP290O15078 2479 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 TRIOBPQ9H2D6 2365 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
TDP1-208ENST00000553989 HMGCRP04035 888 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 MAPKAPK5Q8IW41 473 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
TDP1-208ENST00000553989 TGFBRAP1Q8WUH2 860 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.81□□□□□ -0.68
TDP1-208ENST00000553989 ASCC2Q9H1I8 757 aaPredicted RBP10.81□□□□□ -0.68
TDP1-208ENST00000553989 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
TDP1-208ENST00000553989 PI4KBQ9UBF8 816 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 TNNQ9UQP3 1299 aa10.81□□□□□ -0.68
TDP1-208ENST00000553989 ATAD5Q96QE3 1844 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 BCAR3O75815 825 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 GDF11O95390 407 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 HLA-DOAP06340 250 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 ASNSP08243 561 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 CAPN2P17655 700 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 TNNI3KQ59H18 835 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 NECAB2Q7Z6G3 386 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 PAWRQ96IZ0 340 aaKnown RBP10.8□□□□□ -0.68
TDP1-208ENST00000553989 CWC22Q9HCG8 908 aaKnown RBP10.8□□□□□ -0.68
TDP1-208ENST00000553989 PAK6Q9NQU5 681 aaPredicted RBP10.8□□□□□ -0.68
TDP1-208ENST00000553989 FPGT-TNNI3KV9GXZ4 949 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 FLT1P17948 1338 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 LOC285556D6RIA3 1793 aa10.8□□□□□ -0.68
TDP1-208ENST00000553989 SURF6O75683 361 aaKnown RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 CHRM1P11229 460 aaPredicted RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 CYP2B6P20813 491 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 PDE3AQ14432 1141 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 RRP1BQ14684 758 aaKnown RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 ZKSCAN2Q63HK3 967 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 FTSJ3Q8IY81 847 aaKnown RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 C7orf61Q8IZ16 206 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 DIS3LQ8TF46 1054 aaKnown RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 DBNDD2Q9BQY9 259 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 C1orf115Q9H7X2 142 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 HMX1Q9NP08 348 aaPredicted RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 SAP30BPQ9UHR5 308 aaKnown RBP10.79□□□□□ -0.68
TDP1-208ENST00000553989 MAST2Q6P0Q8 1798 aa10.79□□□□□ -0.68
TDP1-208ENST00000553989 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 BACE1P56817 501 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 SH3D19Q5HYK7 790 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 GPRC5AQ8NFJ5 357 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 FEZ1Q99689 392 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 NUDT12Q9BQG2 462 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 PAGR1Q9BTK6 254 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 PALD1Q9ULE6 856 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 RPTORQ8N122 1335 aa10.78□□□□□ -0.68
TDP1-208ENST00000553989 C19orf81C9J6K1 198 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 STK25O00506 426 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 IDH1O75874 414 aaKnown RBP10.77□□□□□ -0.69
TDP1-208ENST00000553989 CYP2E1P05181 493 aaPredicted RBP10.77□□□□□ -0.69
TDP1-208ENST00000553989 ZKSCAN1P17029 563 aaPredicted RBP10.77□□□□□ -0.69
TDP1-208ENST00000553989 CYP7A1P22680 504 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 ZAP70P43403 619 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 USP5P45974 858 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 HERVK_113P62684 666 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 TRIM32Q13049 653 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 NBR1Q14596 966 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 ZYXQ15942 572 aaKnown RBP10.77□□□□□ -0.69
TDP1-208ENST00000553989 ADGRA1Q86SQ6 560 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 FOXP4Q8IVH2 680 aaPredicted RBP10.77□□□□□ -0.69
TDP1-208ENST00000553989 ITPRIPQ8IWB1 547 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 SOCS4Q8WXH5 440 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 TRIB2Q92519 343 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 P2RX7Q99572 595 aaKnown RBP10.77□□□□□ -0.69
TDP1-208ENST00000553989 WDR18Q9BV38 432 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 NBPF3Q9H094 633 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 CRISPLD2Q9H0B8 497 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 DNAJC18Q9H819 358 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 GPR108Q9NPR9 543 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 STAP2Q9UGK3 403 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 ZBTB21Q9ULJ3 1066 aa10.77□□□□□ -0.69
TDP1-208ENST00000553989 ZMYND8Q9ULU4 1186 aaPredicted RBP10.77□□□□□ -0.69
TDP1-208ENST00000553989 A0A1W2PPC1 479 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 PEX10O60683 326 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
TDP1-208ENST00000553989 MAPK4P31152 587 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 PPP4CP60510 307 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 DYNLL1P63167 89 aaKnown RBP10.76□□□□□ -0.69
TDP1-208ENST00000553989 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 SHROOM1Q2M3G4 852 aaPredicted RBP10.76□□□□□ -0.69
TDP1-208ENST00000553989 WDR78Q5VTH9 848 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 MIGA1Q8NAN2 632 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 GTF3C2Q8WUA4 911 aaPredicted RBP10.76□□□□□ -0.69
TDP1-208ENST00000553989 CCDC8Q9H0W5 538 aaPredicted RBP10.76□□□□□ -0.69
TDP1-208ENST00000553989 C11orf49Q9H6J7 331 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 PIH1D3Q9NQM4 214 aaKnown RBP10.76□□□□□ -0.69
TDP1-208ENST00000553989 GINM1Q9NU53 330 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 MORF4L1Q9UBU8 362 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 GJD2Q9UKL4 321 aa10.76□□□□□ -0.69
TDP1-208ENST00000553989 DOCK3Q8IZD9 2030 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 GH2P01242 217 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms