RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 CERKLQ49MI3 558 aaPredicted RBP27.88■■■□□ 2.05
NEK9-203ENST00000553945 C12orf60Q5U649 245 aa27.88■■■□□ 2.05
NEK9-203ENST00000553945 GIMAP6Q6P9H5 292 aa27.88■■■□□ 2.05
NEK9-203ENST00000553945 CTR9Q6PD62 1173 aa27.88■■■□□ 2.05
NEK9-203ENST00000553945 ZBTB21Q9ULJ3 1066 aa27.88■■■□□ 2.05
NEK9-203ENST00000553945 BTBD19C9JJ37 291 aa27.87■■■□□ 2.05
NEK9-203ENST00000553945 CCDC129Q6ZRS4 1044 aa27.87■■■□□ 2.05
NEK9-203ENST00000553945 TICAM2Q86XR7 235 aa27.87■■■□□ 2.05
NEK9-203ENST00000553945 DYNLL2Q96FJ2 89 aa27.87■■■□□ 2.05
NEK9-203ENST00000553945 CFHR5Q9BXR6 569 aa27.87■■■□□ 2.05
NEK9-203ENST00000553945 R3HDMLQ9H3Y0 253 aa27.87■■■□□ 2.05
NEK9-203ENST00000553945 GINM1Q9NU53 330 aa27.87■■■□□ 2.05
NEK9-203ENST00000553945 ARPP21Q9UBL0 812 aaPredicted RBP27.87■■■□□ 2.05
NEK9-203ENST00000553945 A0A0G2JLL6 359 aaPredicted RBP27.86■■■□□ 2.05
NEK9-203ENST00000553945 PATL2C9JE40 543 aaKnown RBP27.86■■■□□ 2.05
NEK9-203ENST00000553945 GH2P01242 217 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 TDO2P48775 406 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 SPP2Q13103 211 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 CENPQQ7L2Z9 268 aaPredicted RBP27.86■■■□□ 2.05
NEK9-203ENST00000553945 PRRT2Q7Z6L0 340 aaPredicted RBP27.86■■■□□ 2.05
NEK9-203ENST00000553945 ZNF280CQ8ND82 737 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 FAM227BQ96M60 508 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 TBC1D2Q9BYX2 928 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 AS3MTQ9HBK9 375 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 HELLSQ9NRZ9 838 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 CASP8AP2Q9UKL3 1982 aa27.86■■■□□ 2.05
NEK9-203ENST00000553945 SMIM22K7EJ46 135 aa27.85■■■□□ 2.05
NEK9-203ENST00000553945 CRHR2Q13324 411 aa27.85■■■□□ 2.05
NEK9-203ENST00000553945 MOGSQ13724 837 aa27.85■■■□□ 2.05
NEK9-203ENST00000553945 ABCB5Q2M3G0 1257 aa27.85■■■□□ 2.05
NEK9-203ENST00000553945 GADL1Q6ZQY3 521 aa27.85■■■□□ 2.05
NEK9-203ENST00000553945 SLC44A5Q8NCS7 719 aa27.85■■■□□ 2.05
NEK9-203ENST00000553945 EPB41L4AQ9HCS5 686 aaPredicted RBP27.85■■■□□ 2.05
NEK9-203ENST00000553945 SWAP70Q9UH65 585 aa27.85■■■□□ 2.05
NEK9-203ENST00000553945 A0A0D9SFI3 127 aa27.84■■■□□ 2.05
NEK9-203ENST00000553945 NMIQ13287 307 aaPredicted RBP27.84■■■□□ 2.05
NEK9-203ENST00000553945 TAF1CQ15572 869 aaPredicted RBP27.84■■■□□ 2.05
NEK9-203ENST00000553945 TTC22Q5TAA0 569 aa27.84■■■□□ 2.05
NEK9-203ENST00000553945 NACAP1Q9BZK3 213 aa27.84■■■□□ 2.05
NEK9-203ENST00000553945 ZCCHC17Q9NP64 241 aaKnown RBP27.84■■■□□ 2.05
NEK9-203ENST00000553945 PTPRFP10586 1907 aa27.84■■■□□ 2.05
NEK9-203ENST00000553945 MYH8P13535 1937 aa27.84■■■□□ 2.05
NEK9-203ENST00000553945 MINDY4BA8MYZ0 360 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 GPR25O00155 361 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 SDSP20132 328 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 MCMDC2Q4G0Z9 681 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 SBK1Q52WX2 424 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 FASTKD5Q7L8L6 764 aaKnown RBP27.83■■■□□ 2.05
NEK9-203ENST00000553945 ANKRD23Q86SG2 305 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 IFNL3Q8IZI9 196 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 WDR18Q9BV38 432 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 CABP5Q9NP86 173 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 TAOK2Q9UL54 1235 aa27.83■■■□□ 2.05
NEK9-203ENST00000553945 PDHXO00330 501 aa27.82■■■□□ 2.04
NEK9-203ENST00000553945 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
NEK9-203ENST00000553945 ZFYVE28Q9HCC9 887 aa27.82■■■□□ 2.04
NEK9-203ENST00000553945 MPHOSPH10O00566 681 aaKnown RBP27.81■■■□□ 2.04
NEK9-203ENST00000553945 GSPT1P15170 499 aaKnown RBP27.81■■■□□ 2.04
NEK9-203ENST00000553945 CDK8P49336 464 aa27.81■■■□□ 2.04
NEK9-203ENST00000553945 RAB3GAP1Q15042 981 aa27.81■■■□□ 2.04
NEK9-203ENST00000553945 GPAT2Q6NUI2 795 aa27.81■■■□□ 2.04
NEK9-203ENST00000553945 C16orf86Q6ZW13 317 aa27.81■■■□□ 2.04
NEK9-203ENST00000553945 ZNF296Q8WUU4 475 aaPredicted RBP27.81■■■□□ 2.04
NEK9-203ENST00000553945 NOM1Q5C9Z4 860 aaKnown RBP27.8■■■□□ 2.04
NEK9-203ENST00000553945 STK11IPQ8N1F8 1099 aa27.8■■■□□ 2.04
NEK9-203ENST00000553945 NAPBQ9H115 298 aa27.8■■■□□ 2.04
NEK9-203ENST00000553945 DIAPH3Q9NSV4 1193 aa27.8■■■□□ 2.04
NEK9-203ENST00000553945 HMGCS2P54868 508 aa27.79■■■□□ 2.04
NEK9-203ENST00000553945 MTMR2Q13614 643 aa27.79■■■□□ 2.04
NEK9-203ENST00000553945 HIP1O00291 1037 aa27.78■■■□□ 2.04
NEK9-203ENST00000553945 FKTNO75072 461 aa27.78■■■□□ 2.04
NEK9-203ENST00000553945 VPS53Q5VIR6 699 aa27.78■■■□□ 2.04
NEK9-203ENST00000553945 USP17L10C9JJH3 530 aa27.77■■■□□ 2.04
NEK9-203ENST00000553945 FOXP2O15409 715 aa27.77■■■□□ 2.04
NEK9-203ENST00000553945 BACE1P56817 501 aa27.77■■■□□ 2.04
NEK9-203ENST00000553945 DGKZQ13574 1117 aa27.77■■■□□ 2.04
NEK9-203ENST00000553945 SEPT2Q15019 361 aa27.77■■■□□ 2.04
NEK9-203ENST00000553945 CWC27Q6UX04 472 aaKnown RBP27.77■■■□□ 2.04
NEK9-203ENST00000553945 ZNF589Q86UQ0 364 aaPredicted RBP27.77■■■□□ 2.04
NEK9-203ENST00000553945 TNS4Q8IZW8 715 aa27.77■■■□□ 2.04
NEK9-203ENST00000553945 LOC285556D6RIA3 1793 aa27.77■■■□□ 2.04
NEK9-203ENST00000553945 CCDC171Q6TFL3 1326 aa27.76■■■□□ 2.03
NEK9-203ENST00000553945 AKR1B1P15121 316 aa27.76■■■□□ 2.03
NEK9-203ENST00000553945 GUCY1A2P33402 732 aa27.76■■■□□ 2.03
NEK9-203ENST00000553945 SH3D19Q5HYK7 790 aa27.76■■■□□ 2.03
NEK9-203ENST00000553945 PROCA1Q8NCQ7 364 aaPredicted RBP27.76■■■□□ 2.03
NEK9-203ENST00000553945 CCDC17Q96LX7 622 aa27.76■■■□□ 2.03
NEK9-203ENST00000553945 TMOD4Q9NZQ9 345 aa27.76■■■□□ 2.03
NEK9-203ENST00000553945 AGTPBP1Q9UPW5 1226 aa27.76■■■□□ 2.03
NEK9-203ENST00000553945 ROBO3Q96MS0 1386 aa27.75■■■□□ 2.03
NEK9-203ENST00000553945 TREML2Q5T2D2 321 aa27.75■■■□□ 2.03
NEK9-203ENST00000553945 TMEM179Q6ZVK1 233 aa27.75■■■□□ 2.03
NEK9-203ENST00000553945 FEZ1Q99689 392 aa27.75■■■□□ 2.03
NEK9-203ENST00000553945 MKNK2Q9HBH9 465 aa27.75■■■□□ 2.03
NEK9-203ENST00000553945 C19orf81C9J6K1 198 aa27.74■■■□□ 2.03
NEK9-203ENST00000553945 TLR2O60603 784 aa27.74■■■□□ 2.03
NEK9-203ENST00000553945 MFAP1P55081 439 aaKnown RBP27.74■■■□□ 2.03
NEK9-203ENST00000553945 PARK7Q99497 189 aaKnown RBP27.74■■■□□ 2.03
NEK9-203ENST00000553945 CYP2C8P10632 490 aa27.73■■■□□ 2.03
NEK9-203ENST00000553945 ZYXQ15942 572 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms