RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
SRP54-204ENST00000553923 PCDHA4Q9UN74 947 aa5□□□□□ -1.61
SRP54-204ENST00000553923 FAM155AB1AL88 458 aaPredicted RBP4.99□□□□□ -1.61
SRP54-204ENST00000553923 ETV2O00321 342 aaPredicted RBP4.99□□□□□ -1.61
SRP54-204ENST00000553923 INHBBP09529 407 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 TMEM253P0C7T8 217 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 FGD1P98174 961 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 ENOX2Q16206 610 aaKnown RBP4.99□□□□□ -1.61
SRP54-204ENST00000553923 CDKAL1Q5VV42 579 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 LLGL2Q6P1M3 1020 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 LRFN4Q6PJG9 635 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 TPTE2Q6XPS3 522 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 ATG14Q6ZNE5 492 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 SP110Q9HB58 689 aa4.99□□□□□ -1.61
SRP54-204ENST00000553923 ESR1P03372 595 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 MFSD2AQ8NA29 543 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 ABHD4Q8TB40 342 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 UBE2FQ969M7 185 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 CCDC120Q96HB5 630 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 CEP44Q9C0F1 390 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 WNT10AQ9GZT5 417 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 PICK1Q9NRD5 415 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 CYP8B1Q9UNU6 501 aa4.98□□□□□ -1.61
SRP54-204ENST00000553923 SMG5Q9UPR3 1016 aaKnown RBP4.98□□□□□ -1.61
SRP54-204ENST00000553923 DNAJC25-GNG10A0A024R161 153 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 HPXP02790 462 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 SRFP11831 508 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 GSTT1P30711 240 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 ERVFC1P60507 584 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 TNK2Q07912 1038 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 LRRC14Q15048 493 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 RALGPS1Q5JS13 557 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 TTC6Q86TZ1 520 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 MIPEPQ99797 713 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 OSBPL7Q9BZF2 842 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 EPB41L4BQ9H329 900 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 DCP1AQ9NPI6 582 aaPredicted RBP4.97□□□□□ -1.61
SRP54-204ENST00000553923 PPM1HQ9ULR3 514 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 TPX2Q9ULW0 747 aaKnown RBP4.97□□□□□ -1.61
SRP54-204ENST00000553923 SAMM50Q9Y512 469 aa4.97□□□□□ -1.61
SRP54-204ENST00000553923 PNMA6FA0A0J9YX94 578 aa4.96□□□□□ -1.62
SRP54-204ENST00000553923 TREHO43280 583 aa4.96□□□□□ -1.62
SRP54-204ENST00000553923 FBXO24O75426 580 aa4.96□□□□□ -1.62
SRP54-204ENST00000553923 HOXA5P20719 270 aa4.96□□□□□ -1.62
SRP54-204ENST00000553923 GAL3ST3Q96A11 431 aa4.96□□□□□ -1.62
SRP54-204ENST00000553923 ELMO3Q96BJ8 720 aa4.96□□□□□ -1.62
SRP54-204ENST00000553923 PLPPR2Q96GM1 343 aa4.96□□□□□ -1.62
SRP54-204ENST00000553923 PRAMEF27A3QJZ7 478 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 SOWAHDA6NJG2 315 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 CST3P01034 146 aaPredicted RBP4.95□□□□□ -1.62
SRP54-204ENST00000553923 CELA3AP09093 270 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 CDK8P49336 464 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 LINC00310P59036 64 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 PLCB3Q01970 1234 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 CIAPIN1Q6FI81 312 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 LETMD1Q6P1Q0 360 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.95□□□□□ -1.62
SRP54-204ENST00000553923 SLC26A8Q96RN1 970 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 SRCIN1Q9C0H9 1055 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 SLAMF8Q9P0V8 285 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 ZSWIM5Q9P217 1185 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 TMEM59LQ9UK28 342 aa4.95□□□□□ -1.62
SRP54-204ENST00000553923 TCAF2A6NFQ2 919 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 WASH4PA8MWX3 477 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 CBX7O95931 251 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 KIR3DL1P43629 444 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 CTSWP56202 376 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 PCNX4Q63HM2 1172 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 MYLIPQ8WY64 445 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 KCNN1Q92952 543 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 Q96M66 194 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 ADAMTS10Q9H324 1103 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 DCTN4Q9UJW0 460 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 SNCAIPQ9Y6H5 919 aa4.94□□□□□ -1.62
SRP54-204ENST00000553923 GFRA2O00451 464 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 GAB4Q2WGN9 574 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 PRAMEF13Q5VWM6 474 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 TMPRSS7Q7RTY8 843 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 HDXQ7Z353 690 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 HID1Q8IV36 788 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 COX4I2Q96KJ9 171 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 SETDB2Q96T68 719 aa4.93□□□□□ -1.62
SRP54-204ENST00000553923 DUSP15Q9H1R2 295 aaPredicted RBP4.93□□□□□ -1.62
SRP54-204ENST00000553923 NUAK1O60285 661 aa4.92□□□□□ -1.62
SRP54-204ENST00000553923 RAC2P15153 192 aa4.92□□□□□ -1.62
SRP54-204ENST00000553923 TRHRP34981 398 aaPredicted RBP4.92□□□□□ -1.62
SRP54-204ENST00000553923 ZNF746Q6NUN9 644 aaPredicted RBP4.92□□□□□ -1.62
SRP54-204ENST00000553923 CDH24Q86UP0 819 aa4.92□□□□□ -1.62
SRP54-204ENST00000553923 PIWIL2Q8TC59 973 aaKnown RBP4.92□□□□□ -1.62
SRP54-204ENST00000553923 FBF1Q8TES7 1133 aa4.92□□□□□ -1.62
SRP54-204ENST00000553923 MCOLN1Q9GZU1 580 aa4.92□□□□□ -1.62
SRP54-204ENST00000553923 RNF32Q9H0A6 362 aa4.92□□□□□ -1.62
SRP54-204ENST00000553923 JAG2Q9Y219 1238 aa4.92□□□□□ -1.62
SRP54-204ENST00000553923 MYOCOSA0A1B0GUC4 107 aa4.91□□□□□ -1.62
SRP54-204ENST00000553923 GIPC1O14908 333 aa4.91□□□□□ -1.62
SRP54-204ENST00000553923 HK2P52789 917 aa4.91□□□□□ -1.62
SRP54-204ENST00000553923 XAGE3Q8WTP9 111 aa4.91□□□□□ -1.62
SRP54-204ENST00000553923 IRF2BPLQ9H1B7 796 aa4.91□□□□□ -1.62
SRP54-204ENST00000553923 PARD6AQ9NPB6 346 aa4.91□□□□□ -1.62
SRP54-204ENST00000553923 TJP2Q9UDY2 1190 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms