RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 FLT1P17948 1338 aa14.83□□□□□ -0.04
VIPAS39-206ENST00000553888 CDKL5O76039 1030 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 BAG6P46379 1132 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 TFAP4Q01664 338 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 KIF23Q02241 960 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 RNF214Q8ND24 703 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 TMX4Q9H1E5 349 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 KCNJ14Q9UNX9 436 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 CLIC4Q9Y696 253 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 ELP1O95163 1332 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 FMNL1O95466 1100 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 SLURP2P0DP57 97 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 PDE4BQ07343 736 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 CAMK4Q16566 473 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 AOC3Q16853 763 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 STYK1Q6J9G0 422 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 CPLX2Q6PUV4 134 aaKnown RBP14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 IL17RBQ9NRM6 502 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 MTMR7Q9Y216 660 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 GAKO14976 1311 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 C21orf2O43822 256 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 IFNAR1P17181 557 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 CCDC183Q5T5S1 534 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 RCSD1Q6JBY9 416 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 SHISA4Q96DD7 197 aa14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 ZNF646O15015 1829 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-206ENST00000553888 NID2Q14112 1375 aa14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 TROAPQ12815 778 aa14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 GLIPR1L2Q4G1C9 344 aa14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 PIBF1Q8WXW3 757 aa14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 TMTC2Q8N394 836 aa14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 SYAP1Q96A49 352 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 DDX4Q9NQI0 724 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-206ENST00000553888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 GOLGA6L4A6NEF3 574 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 NR1I2O75469 434 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 CATIPQ7Z7H3 387 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 KIAA0825Q8IV33 1275 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 BICD2Q8TD16 824 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 C7orf43Q8WVR3 580 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 DACT1Q9NYF0 836 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 CFAP45Q9UL16 551 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 ECE2O60344 883 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 MTA3Q9BTC8 594 aa14.8□□□□□ -0.04
VIPAS39-206ENST00000553888 CACNB3P54284 484 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 MYSM1Q5VVJ2 828 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 TMED8Q6PL24 325 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 FAM163AQ96GL9 167 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 MYH8P13535 1937 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 PCP11498 1178 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 RASA1P20936 1047 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 NASPP49321 788 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 EYA3Q99504 573 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 GOLPH3LQ9H4A5 285 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 RCOR1Q9UKL0 485 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 ROBO3Q96MS0 1386 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 FUT2Q10981 343 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 CNKSR1Q969H4 720 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 SNED1Q8TER0 1413 aa14.79□□□□□ -0.04
VIPAS39-206ENST00000553888 STK36Q9NRP7 1315 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 ZBTB7AO95365 584 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 VEGFAP15692 232 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 CDK8P49336 464 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 ZNF396Q96N95 335 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 BTBD18B2RXH4 712 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 WDHD1O75717 1129 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 TSPY3P0CV98 308 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 TSPY8P0CW00 308 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 TRIM22Q8IYM9 498 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 SRBD1Q8N5C6 995 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 OXER1Q8TDS5 423 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 USP40Q9NVE5 1235 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 ISY1Q9ULR0 285 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 V9GY48 417 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-206ENST00000553888 ME1P48163 572 aa14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 NFIAQ12857 509 aa14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 NR5A1Q13285 461 aa14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 GNL2Q13823 731 aaKnown RBP14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 PKN1Q16512 942 aa14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 AMOTL1Q8IY63 956 aa14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 CKAP2LQ8IYA6 745 aa14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 TSPY26PQ9H489 355 aa14.77□□□□□ -0.04
VIPAS39-206ENST00000553888 DPEP1P16444 411 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 TRIM29Q14134 588 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 CDC42EP5Q6NZY7 148 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 ZFPM1Q8IX07 1006 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 SLF2Q8IX21 1173 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 ZNF444Q8N0Y2 327 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 PCDHA7Q9UN72 937 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 SRCAPQ6ZRS2 3230 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 C10orf71Q711Q0 1435 aa14.77□□□□□ -0.05
VIPAS39-206ENST00000553888 CCDC196A0A1B0GTZ2 297 aa14.76□□□□□ -0.05
VIPAS39-206ENST00000553888 APOBEC3HQ6NTF7 200 aaKnown RBP14.76□□□□□ -0.05
VIPAS39-206ENST00000553888 CLEC10AQ8IUN9 316 aa14.76□□□□□ -0.05
VIPAS39-206ENST00000553888 STAG2Q8N3U4 1231 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms