RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 EVX2Q03828 476 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 EARS2Q5JPH6 523 aaKnown RBP16.69■□□□□ 0.26
ACTN1-211ENST00000553882 VSTM4Q8IW00 320 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 MARCH10Q8NA82 808 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-211ENST00000553882 CGNQ9P2M7 1197 aaKnown RBP16.69■□□□□ 0.26
ACTN1-211ENST00000553882 HOOK1Q9UJC3 728 aaKnown RBP16.69■□□□□ 0.26
ACTN1-211ENST00000553882 NFE2L3Q9Y4A8 694 aa16.69■□□□□ 0.26
ACTN1-211ENST00000553882 PSDA5PKW4 1024 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 SEC23AQ15436 765 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 ERFEQ4G0M1 354 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 LRRN4CLQ8ND94 238 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 COL14A1Q05707 1796 aaKnown RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 TAF1P21675 1872 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 KCNQ2O43526 872 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 SLU7O95391 586 aaKnown RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 ZSCAN20P17040 1043 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 SMARCE1Q969G3 411 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 MYH2Q9UKX2 1941 aa16.68■□□□□ 0.26
ACTN1-211ENST00000553882 COL1A1P02452 1464 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-211ENST00000553882 CDK11BP21127 795 aaKnown RBP16.67■□□□□ 0.26
ACTN1-211ENST00000553882 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-211ENST00000553882 BCORQ6W2J9 1755 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 BAZ2AQ9UIF9 1905 aaKnown RBP16.67■□□□□ 0.26
ACTN1-211ENST00000553882 CASP1P29466 404 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 KMT5BQ4FZB7 885 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
ACTN1-211ENST00000553882 DHX58Q96C10 678 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 ERO1AQ96HE7 468 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 EPSTI1Q96J88 318 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 ZSCAN10Q96SZ4 725 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-211ENST00000553882 DNAI1Q9UI46 699 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 SRPRBQ9Y5M8 271 aaKnown RBP16.67■□□□□ 0.26
ACTN1-211ENST00000553882 BCL9LQ86UU0 1499 aa16.67■□□□□ 0.26
ACTN1-211ENST00000553882 WNT7AO00755 349 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
ACTN1-211ENST00000553882 FAM177A1Q8N128 213 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-211ENST00000553882 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
ACTN1-211ENST00000553882 ZNF804BA4D1E1 1349 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 ACTN4O43707 911 aaKnown RBP16.66■□□□□ 0.26
ACTN1-211ENST00000553882 KLRK1P26718 216 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 AFMP43652 599 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 PKN1Q16512 942 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 SLC4A8Q2Y0W8 1093 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 ZNF384Q8TF68 577 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 RNF26Q9BY78 433 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-211ENST00000553882 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 A0A087X0B3 334 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 NMT2O60551 498 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 SAMSN1Q9NSI8 373 aaKnown RBP16.66■□□□□ 0.26
ACTN1-211ENST00000553882 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
ACTN1-211ENST00000553882 MYH6P13533 1939 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 RTL9Q8NET4 1388 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 TRIM75PA6NK02 468 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 IGSF3O75054 1194 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 KCNJ6P48051 423 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 PDE4CQ08493 712 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 ERCC6LQ2NKX8 1250 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 CATIPQ7Z7H3 387 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 CELF1Q92879 486 aaKnown RBP16.65■□□□□ 0.26
ACTN1-211ENST00000553882 MED15Q96RN5 788 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 FEZ1Q99689 392 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 SPATA31A1Q5TZJ5 1347 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-211ENST00000553882 USP17L12C9JPN9 530 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 USP17L21D6R901 530 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-211ENST00000553882 SARSP49591 514 aaKnown RBP16.65■□□□□ 0.26
ACTN1-211ENST00000553882 ADKP55263 362 aaKnown RBP16.65■□□□□ 0.26
ACTN1-211ENST00000553882 MORC3Q14149 939 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 KLHL10Q6JEL2 608 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
ACTN1-211ENST00000553882 COL16A1Q07092 1604 aaPredicted RBP16.64■□□□□ 0.25
ACTN1-211ENST00000553882 XBP1P17861 261 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 KRT2P35908 639 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 ETF1P62495 437 aaKnown RBP16.64■□□□□ 0.25
ACTN1-211ENST00000553882 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
ACTN1-211ENST00000553882 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 FAM84BQ96KN1 310 aaPredicted RBP16.64■□□□□ 0.25
ACTN1-211ENST00000553882 MTA3Q9BTC8 594 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 TMX1Q9H3N1 280 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 MINPP1Q9UNW1 487 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 PLCH1Q4KWH8 1693 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 KDM4FA0A1W2PPD8 638 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 FANCGO15287 622 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 FUT2Q10981 343 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 NT5DC1Q5TFE4 455 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
ACTN1-211ENST00000553882 MLKLQ8NB16 471 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 L2HGDHQ9H9P8 463 aa16.64■□□□□ 0.25
ACTN1-211ENST00000553882 RCAN1P53805 252 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms