RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-206ENST00000553830 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 NAP1L2Q9ULW6 460 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-206ENST00000553830 MYH4Q9Y623 1939 aa16.64■□□□□ 0.26
PRKCH-206ENST00000553830 GDF11O95390 407 aa16.64■□□□□ 0.25
PRKCH-206ENST00000553830 CD2BP2O95400 341 aaKnown RBP16.64■□□□□ 0.25
PRKCH-206ENST00000553830 PCP11498 1178 aaKnown RBP16.64■□□□□ 0.25
PRKCH-206ENST00000553830 AKR1B1P15121 316 aa16.64■□□□□ 0.25
PRKCH-206ENST00000553830 PRKG1Q13976 671 aa16.64■□□□□ 0.25
PRKCH-206ENST00000553830 MAP1SQ66K74 1059 aaPredicted RBP16.64■□□□□ 0.25
PRKCH-206ENST00000553830 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
PRKCH-206ENST00000553830 FZD1Q9UP38 647 aa16.64■□□□□ 0.25
PRKCH-206ENST00000553830 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
PRKCH-206ENST00000553830 NMT2O60551 498 aa16.63■□□□□ 0.25
PRKCH-206ENST00000553830 FGRP09769 529 aa16.63■□□□□ 0.25
PRKCH-206ENST00000553830 AK2P54819 239 aa16.63■□□□□ 0.25
PRKCH-206ENST00000553830 SHROOM1Q2M3G4 852 aaPredicted RBP16.63■□□□□ 0.25
PRKCH-206ENST00000553830 UBAC1Q9BSL1 405 aa16.63■□□□□ 0.25
PRKCH-206ENST00000553830 EXOSC10Q01780 885 aaKnown RBP16.62■□□□□ 0.25
PRKCH-206ENST00000553830 CERKLQ49MI3 558 aaPredicted RBP16.62■□□□□ 0.25
PRKCH-206ENST00000553830 TMEM67Q5HYA8 995 aa16.62■□□□□ 0.25
PRKCH-206ENST00000553830 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
PRKCH-206ENST00000553830 ZC3H15Q8WU90 426 aaKnown RBP16.62■□□□□ 0.25
PRKCH-206ENST00000553830 TTC14Q96N46 770 aa16.62■□□□□ 0.25
PRKCH-206ENST00000553830 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
PRKCH-206ENST00000553830 PPP2R3BQ9Y5P8 575 aa16.62■□□□□ 0.25
PRKCH-206ENST00000553830 DOCK1Q14185 1865 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 GREB1LQ9C091 1923 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-206ENST00000553830 ERICH2A1L162 156 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 APOBRQ0VD83 1088 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 DCAF15Q66K64 600 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 NFXL1Q6ZNB6 911 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 IQCA1Q86XH1 822 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 CLEC10AQ8IUN9 316 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 BRF1Q92994 677 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 CDCA5Q96FF9 252 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-206ENST00000553830 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 GPBP1L1Q9HC44 474 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-206ENST00000553830 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 TNKSO95271 1327 aa16.61■□□□□ 0.25
PRKCH-206ENST00000553830 OTOFQ9HC10 1997 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 TRAF5O00463 557 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
PRKCH-206ENST00000553830 ATP2B2Q01814 1243 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 TOB2Q14106 344 aaPredicted RBP16.6■□□□□ 0.25
PRKCH-206ENST00000553830 TTLL12Q14166 644 aaPredicted RBP16.6■□□□□ 0.25
PRKCH-206ENST00000553830 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
PRKCH-206ENST00000553830 WTAPQ15007 396 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
PRKCH-206ENST00000553830 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 SUPT20HL1Q3ZLR7 823 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 CDC37L1Q7L3B6 337 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 LDHDQ86WU2 507 aa16.6■□□□□ 0.25
PRKCH-206ENST00000553830 GH2P01242 217 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 FMR1Q06787 632 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRKCH-206ENST00000553830 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 METTL16Q86W50 562 aaKnown RBP16.59■□□□□ 0.25
PRKCH-206ENST00000553830 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 HOOK2Q96ED9 719 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 ZNF341Q9BYN7 854 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.59■□□□□ 0.25
PRKCH-206ENST00000553830 MTMR7Q9Y216 660 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 WDR19Q8NEZ3 1342 aa16.59■□□□□ 0.25
PRKCH-206ENST00000553830 TBC1D12O60347 775 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 NF2P35240 595 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 JAG1P78504 1218 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 STK3Q13188 491 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
PRKCH-206ENST00000553830 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 ENAHQ8N8S7 591 aaPredicted RBP16.58■□□□□ 0.24
PRKCH-206ENST00000553830 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 IGDCC4Q8TDY8 1250 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 CCDC17Q96LX7 622 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 TBC1D2Q9BYX2 928 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 CABP5Q9NP86 173 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
PRKCH-206ENST00000553830 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
PRKCH-206ENST00000553830 TRPM7Q96QT4 1865 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 KLF18A0A0U1RQI7 1052 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 CCDC69A6NI79 296 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 LARGE1O95461 756 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 INPP5BP32019 993 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 SLC4A3P48751 1232 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 BECN1Q14457 450 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 SEPT2Q15019 361 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 ANKRD1Q15327 319 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 CCDC84Q86UT8 332 aaPredicted RBP16.57■□□□□ 0.24
PRKCH-206ENST00000553830 SPRYD3Q8NCJ5 442 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 WRNIP1Q96S55 665 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 MYL10Q9BUA6 226 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRKCH-206ENST00000553830 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
PRKCH-206ENST00000553830 STX8Q9UNK0 236 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms