RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HERC5Q9UII4 1024 aaKnown RBP19.31■□□□□ 0.68
ACTN1-209ENST00000553659 NR2E3Q9Y5X4 410 aa19.31■□□□□ 0.68
ACTN1-209ENST00000553659 FOCADQ5VW36 1801 aa19.3■□□□□ 0.68
ACTN1-209ENST00000553659 USP17L5A8MUK1 530 aa19.3■□□□□ 0.68
ACTN1-209ENST00000553659 TFRCP02786 760 aaKnown RBP19.3■□□□□ 0.68
ACTN1-209ENST00000553659 PABPC4Q13310 644 aaKnown RBP eCLIP19.3■□□□□ 0.68
ACTN1-209ENST00000553659 RRP1BQ14684 758 aaKnown RBP19.3■□□□□ 0.68
ACTN1-209ENST00000553659 SSH3Q8TE77 659 aa19.3■□□□□ 0.68
ACTN1-209ENST00000553659 NOL10Q9BSC4 688 aaKnown RBP19.3■□□□□ 0.68
ACTN1-209ENST00000553659 PAK6Q9NQU5 681 aaPredicted RBP19.3■□□□□ 0.68
ACTN1-209ENST00000553659 PI4KBQ9UBF8 816 aa19.3■□□□□ 0.68
ACTN1-209ENST00000553659 SIPA1L1O43166 1804 aa19.3■□□□□ 0.68
ACTN1-209ENST00000553659 HMGCS2P54868 508 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 POLA2Q14181 598 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 SH3D19Q5HYK7 790 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 PLEKHM2Q8IWE5 1019 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 SH3RF3Q8TEJ3 882 aaPredicted RBP19.29■□□□□ 0.68
ACTN1-209ENST00000553659 TBC1D32Q96NH3 1257 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 DEFB118Q96PH6 123 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 LRRCC1Q9C099 1032 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 DHX36Q9H2U1 1008 aaKnown RBP19.29■□□□□ 0.68
ACTN1-209ENST00000553659 OSBPL3Q9H4L5 887 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 AS3MTQ9HBK9 375 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 TAOK2Q9UL54 1235 aa19.29■□□□□ 0.68
ACTN1-209ENST00000553659 BAG3O95817 575 aa19.28■□□□□ 0.68
ACTN1-209ENST00000553659 BECN1Q14457 450 aa19.28■□□□□ 0.68
ACTN1-209ENST00000553659 TTC22Q5TAA0 569 aa19.28■□□□□ 0.68
ACTN1-209ENST00000553659 CRISPLD2Q9H0B8 497 aa19.28■□□□□ 0.68
ACTN1-209ENST00000553659 PRO3102Q9H379 93 aa19.28■□□□□ 0.68
ACTN1-209ENST00000553659 GPR108Q9NPR9 543 aa19.28■□□□□ 0.68
ACTN1-209ENST00000553659 MAST2Q6P0Q8 1798 aa19.28■□□□□ 0.68
ACTN1-209ENST00000553659 ALPK3Q96L96 1907 aa19.27■□□□□ 0.68
ACTN1-209ENST00000553659 CDC45O75419 566 aa19.27■□□□□ 0.68
ACTN1-209ENST00000553659 PLCG2P16885 1265 aa19.27■□□□□ 0.68
ACTN1-209ENST00000553659 NAA16Q6N069 864 aaPredicted RBP19.27■□□□□ 0.68
ACTN1-209ENST00000553659 CASC1Q6TDU7 716 aa19.27■□□□□ 0.68
ACTN1-209ENST00000553659 WDR18Q9BV38 432 aa19.27■□□□□ 0.68
ACTN1-209ENST00000553659 ASCC2Q9H1I8 757 aaPredicted RBP19.27■□□□□ 0.68
ACTN1-209ENST00000553659 AATFQ9NY61 560 aaKnown RBP eCLIP19.27■□□□□ 0.68
ACTN1-209ENST00000553659 PLXNB2O15031 1838 aa19.27■□□□□ 0.68
ACTN1-209ENST00000553659 PPP4CP60510 307 aa19.26■□□□□ 0.67
ACTN1-209ENST00000553659 CCDC158Q5M9N0 1113 aa19.26■□□□□ 0.67
ACTN1-209ENST00000553659 TTC39AQ5SRH9 613 aa19.26■□□□□ 0.67
ACTN1-209ENST00000553659 FOXP4Q8IVH2 680 aaPredicted RBP19.26■□□□□ 0.67
ACTN1-209ENST00000553659 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
ACTN1-209ENST00000553659 SNRKQ9NRH2 765 aa19.26■□□□□ 0.67
ACTN1-209ENST00000553659 GJD2Q9UKL4 321 aa19.26■□□□□ 0.67
ACTN1-209ENST00000553659 EVI5O60447 810 aa19.25■□□□□ 0.67
ACTN1-209ENST00000553659 ASNSP08243 561 aa19.25■□□□□ 0.67
ACTN1-209ENST00000553659 TNNI3KQ59H18 835 aa19.25■□□□□ 0.67
ACTN1-209ENST00000553659 TGFBRAP1Q8WUH2 860 aa19.25■□□□□ 0.67
ACTN1-209ENST00000553659 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.25■□□□□ 0.67
ACTN1-209ENST00000553659 FPGT-TNNI3KV9GXZ4 949 aa19.25■□□□□ 0.67
ACTN1-209ENST00000553659 MYH1P12882 1939 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 IGSF3O75054 1194 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 SEC24BO95487 1268 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 HMGCRP04035 888 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 HOXA7P31268 230 aaPredicted RBP19.24■□□□□ 0.67
ACTN1-209ENST00000553659 BACE1P56817 501 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 METTL16Q86W50 562 aaKnown RBP19.24■□□□□ 0.67
ACTN1-209ENST00000553659 ERC1Q8IUD2 1116 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 ZNF512BQ96KM6 892 aaPredicted RBP19.24■□□□□ 0.67
ACTN1-209ENST00000553659 DBNDD2Q9BQY9 259 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 MORF4L1Q9UBU8 362 aa19.24■□□□□ 0.67
ACTN1-209ENST00000553659 C19orf81C9J6K1 198 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 CYP2E1P05181 493 aaPredicted RBP19.23■□□□□ 0.67
ACTN1-209ENST00000553659 MTMR2Q13614 643 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 ADGRA1Q86SQ6 560 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 MAPKAPK5Q8IW41 473 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 KIF1BPQ96EK5 621 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 PAWRQ96IZ0 340 aaKnown RBP19.23■□□□□ 0.67
ACTN1-209ENST00000553659 C22orf23Q9BZE7 217 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 GINM1Q9NU53 330 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 RPTORQ8N122 1335 aa19.23■□□□□ 0.67
ACTN1-209ENST00000553659 IRX3P78415 501 aaPredicted RBP19.22■□□□□ 0.67
ACTN1-209ENST00000553659 JAG1P78504 1218 aa19.22■□□□□ 0.67
ACTN1-209ENST00000553659 OS9Q13438 667 aaPredicted RBP19.22■□□□□ 0.67
ACTN1-209ENST00000553659 NECAB2Q7Z6G3 386 aa19.22■□□□□ 0.67
ACTN1-209ENST00000553659 CRACR2BQ8N4Y2 399 aaPredicted RBP19.22■□□□□ 0.67
ACTN1-209ENST00000553659 ANKLE1Q8NAG6 615 aa19.22■□□□□ 0.67
ACTN1-209ENST00000553659 P2RX7Q99572 595 aaKnown RBP19.22■□□□□ 0.67
ACTN1-209ENST00000553659 DNAJC18Q9H819 358 aa19.22■□□□□ 0.67
ACTN1-209ENST00000553659 HMX1Q9NP08 348 aaPredicted RBP19.22■□□□□ 0.67
ACTN1-209ENST00000553659 FLT1P17948 1338 aa19.22■□□□□ 0.67
ACTN1-209ENST00000553659 A0A1W2PPC1 479 aa19.21■□□□□ 0.67
ACTN1-209ENST00000553659 USP17L10C9JJH3 530 aa19.21■□□□□ 0.67
ACTN1-209ENST00000553659 SURF6O75683 361 aaKnown RBP19.21■□□□□ 0.67
ACTN1-209ENST00000553659 MFAP1P55081 439 aaKnown RBP19.21■□□□□ 0.67
ACTN1-209ENST00000553659 TRIM34Q9BYJ4 488 aa19.21■□□□□ 0.67
ACTN1-209ENST00000553659 PALD1Q9ULE6 856 aa19.21■□□□□ 0.67
ACTN1-209ENST00000553659 EXOC6BQ9Y2D4 811 aa19.21■□□□□ 0.67
ACTN1-209ENST00000553659 ZAP70P43403 619 aa19.2■□□□□ 0.66
ACTN1-209ENST00000553659 RBM25P49756 843 aaKnown RBP19.2■□□□□ 0.66
ACTN1-209ENST00000553659 GPRC5AQ8NFJ5 357 aa19.2■□□□□ 0.66
ACTN1-209ENST00000553659 DIS3LQ8TF46 1054 aaKnown RBP19.2■□□□□ 0.66
ACTN1-209ENST00000553659 STAP2Q9UGK3 403 aa19.2■□□□□ 0.66
ACTN1-209ENST00000553659 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
ACTN1-209ENST00000553659 MX1P20591 662 aa19.19■□□□□ 0.66
ACTN1-209ENST00000553659 PDE1AP54750 535 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms