RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SLC44A5Q8NCS7 719 aa27.32■■□□□ 1.96
TDP1-206ENST00000553569 SAGE1Q9NXZ1 904 aa27.32■■□□□ 1.96
TDP1-206ENST00000553569 TESPA1A2RU30 521 aaPredicted RBP27.31■■□□□ 1.96
TDP1-206ENST00000553569 CETPP11597 493 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 SHMT1P34896 483 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 LBX1P52954 281 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 JAG1P78504 1218 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 TATDN1Q6P1N9 297 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 GIMAP6Q6P9H5 292 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 DIAPH3Q9NSV4 1193 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 ZBTB21Q9ULJ3 1066 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 KCNH4Q9UQ05 1017 aa27.31■■□□□ 1.96
TDP1-206ENST00000553569 PTPRFP10586 1907 aa27.3■■□□□ 1.96
TDP1-206ENST00000553569 TRIM75PA6NK02 468 aa27.3■■□□□ 1.96
TDP1-206ENST00000553569 PATL2C9JE40 543 aaKnown RBP27.3■■□□□ 1.96
TDP1-206ENST00000553569 CERKLQ49MI3 558 aaPredicted RBP27.3■■□□□ 1.96
TDP1-206ENST00000553569 MCMDC2Q4G0Z9 681 aa27.3■■□□□ 1.96
TDP1-206ENST00000553569 PTPN18Q99952 460 aa27.3■■□□□ 1.96
TDP1-206ENST00000553569 NACAP1Q9BZK3 213 aa27.3■■□□□ 1.96
TDP1-206ENST00000553569 AFG3L2Q9Y4W6 797 aa27.3■■□□□ 1.96
TDP1-206ENST00000553569 MINDY4BA8MYZ0 360 aa27.29■■□□□ 1.96
TDP1-206ENST00000553569 GH2P01242 217 aa27.29■■□□□ 1.96
TDP1-206ENST00000553569 ASNSP08243 561 aa27.29■■□□□ 1.96
TDP1-206ENST00000553569 IFNL3Q8IZI9 196 aa27.29■■□□□ 1.96
TDP1-206ENST00000553569 USP17L5A8MUK1 530 aa27.28■■□□□ 1.96
TDP1-206ENST00000553569 TBC1D8O95759 1140 aa27.28■■□□□ 1.96
TDP1-206ENST00000553569 OTUD7BQ6GQQ9 843 aa27.28■■□□□ 1.96
TDP1-206ENST00000553569 ZNF589Q86UQ0 364 aaPredicted RBP27.28■■□□□ 1.96
TDP1-206ENST00000553569 NAPBQ9H115 298 aa27.28■■□□□ 1.96
TDP1-206ENST00000553569 SWAP70Q9UH65 585 aa27.28■■□□□ 1.96
TDP1-206ENST00000553569 HIP1O00291 1037 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 CXCL11O14625 94 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 ALDH1A1P00352 501 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 ABCB5Q2M3G0 1257 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 SBK1Q52WX2 424 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 VPS53Q5VIR6 699 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 CWC27Q6UX04 472 aaKnown RBP27.27■■□□□ 1.96
TDP1-206ENST00000553569 STK11IPQ8N1F8 1099 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 FAM43AQ8N2R8 423 aa27.27■■□□□ 1.96
TDP1-206ENST00000553569 CCDC171Q6TFL3 1326 aa27.26■■□□□ 1.95
TDP1-206ENST00000553569 FOXP2O15409 715 aa27.26■■□□□ 1.95
TDP1-206ENST00000553569 C16orf86Q6ZW13 317 aa27.26■■□□□ 1.95
TDP1-206ENST00000553569 ZNF280CQ8ND82 737 aa27.26■■□□□ 1.95
TDP1-206ENST00000553569 AS3MTQ9HBK9 375 aa27.26■■□□□ 1.95
TDP1-206ENST00000553569 GINM1Q9NU53 330 aa27.26■■□□□ 1.95
TDP1-206ENST00000553569 BTBD19C9JJ37 291 aa27.25■■□□□ 1.95
TDP1-206ENST00000553569 MPHOSPH10O00566 681 aaKnown RBP27.25■■□□□ 1.95
TDP1-206ENST00000553569 CDK8P49336 464 aa27.25■■□□□ 1.95
TDP1-206ENST00000553569 SPP2Q13103 211 aa27.25■■□□□ 1.95
TDP1-206ENST00000553569 RAB3GAP1Q15042 981 aa27.25■■□□□ 1.95
TDP1-206ENST00000553569 GADL1Q6ZQY3 521 aa27.25■■□□□ 1.95
TDP1-206ENST00000553569 TBC1D2Q9BYX2 928 aa27.25■■□□□ 1.95
TDP1-206ENST00000553569 CABP5Q9NP86 173 aa27.25■■□□□ 1.95
TDP1-206ENST00000553569 A0A0G2JLL6 359 aaPredicted RBP27.24■■□□□ 1.95
TDP1-206ENST00000553569 PRRT2Q7Z6L0 340 aaPredicted RBP27.24■■□□□ 1.95
TDP1-206ENST00000553569 PPP4R2Q9NY27 417 aa27.24■■□□□ 1.95
TDP1-206ENST00000553569 ROBO3Q96MS0 1386 aa27.23■■□□□ 1.95
TDP1-206ENST00000553569 MOGSQ13724 837 aa27.23■■□□□ 1.95
TDP1-206ENST00000553569 ERICH6BQ5W0A0 696 aa27.23■■□□□ 1.95
TDP1-206ENST00000553569 R3HDMLQ9H3Y0 253 aa27.23■■□□□ 1.95
TDP1-206ENST00000553569 TAOK2Q9UL54 1235 aa27.23■■□□□ 1.95
TDP1-206ENST00000553569 CASP8AP2Q9UKL3 1982 aa27.22■■□□□ 1.95
TDP1-206ENST00000553569 MFAP1P55081 439 aaKnown RBP27.22■■□□□ 1.95
TDP1-206ENST00000553569 TAF1CQ15572 869 aaPredicted RBP27.22■■□□□ 1.95
TDP1-206ENST00000553569 LOC285556D6RIA3 1793 aa27.22■■□□□ 1.95
TDP1-206ENST00000553569 AKR1B1P15121 316 aa27.21■■□□□ 1.95
TDP1-206ENST00000553569 CRHR2Q13324 411 aa27.21■■□□□ 1.95
TDP1-206ENST00000553569 MTMR2Q13614 643 aa27.21■■□□□ 1.95
TDP1-206ENST00000553569 FASTKD5Q7L8L6 764 aaKnown RBP27.21■■□□□ 1.95
TDP1-206ENST00000553569 WDR18Q9BV38 432 aa27.21■■□□□ 1.95
TDP1-206ENST00000553569 PRDM10Q9NQV6 1147 aa27.21■■□□□ 1.95
TDP1-206ENST00000553569 HSPD1P10809 573 aaKnown RBP27.2■■□□□ 1.94
TDP1-206ENST00000553569 HMGCS2P54868 508 aa27.2■■□□□ 1.94
TDP1-206ENST00000553569 PPARAQ07869 468 aa27.2■■□□□ 1.94
TDP1-206ENST00000553569 DGKZQ13574 1117 aa27.2■■□□□ 1.94
TDP1-206ENST00000553569 SEPT2Q15019 361 aa27.2■■□□□ 1.94
TDP1-206ENST00000553569 ANKRD23Q86SG2 305 aa27.2■■□□□ 1.94
TDP1-206ENST00000553569 PDHXO00330 501 aa27.19■■□□□ 1.94
TDP1-206ENST00000553569 GUCY1A2P33402 732 aa27.19■■□□□ 1.94
TDP1-206ENST00000553569 GPAT2Q6NUI2 795 aa27.19■■□□□ 1.94
TDP1-206ENST00000553569 CFHR5Q9BXR6 569 aa27.19■■□□□ 1.94
TDP1-206ENST00000553569 MKNK2Q9HBH9 465 aa27.19■■□□□ 1.94
TDP1-206ENST00000553569 TMEM179Q6ZVK1 233 aa27.18■■□□□ 1.94
TDP1-206ENST00000553569 CCDC17Q96LX7 622 aa27.18■■□□□ 1.94
TDP1-206ENST00000553569 FEZ1Q99689 392 aa27.18■■□□□ 1.94
TDP1-206ENST00000553569 ZFYVE28Q9HCC9 887 aa27.18■■□□□ 1.94
TDP1-206ENST00000553569 ZCCHC17Q9NP64 241 aaKnown RBP27.18■■□□□ 1.94
TDP1-206ENST00000553569 USP17L10C9JJH3 530 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 GPR25O00155 361 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 PRDM1O75626 825 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 SLC3A2P08195 630 aaKnown RBP27.17■■□□□ 1.94
TDP1-206ENST00000553569 CHMLP26374 656 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 BACE1P56817 501 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 ALX1Q15699 326 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 ZYXQ15942 572 aaKnown RBP27.17■■□□□ 1.94
TDP1-206ENST00000553569 CLEC10AQ8IUN9 316 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 IL25Q9H293 177 aa27.17■■□□□ 1.94
TDP1-206ENST00000553569 FGAP02671 866 aa27.16■■□□□ 1.94
TDP1-206ENST00000553569 RASA1P20936 1047 aa27.16■■□□□ 1.94
TDP1-206ENST00000553569 CTDSPL2Q05D32 466 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms