RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
APEX1-205ENST00000553555 GPRC5DQ9NZD1 345 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 PI4KBQ9UBF8 816 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 SWAP70Q9UH65 585 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 UTRNP46939 3433 aa16.14■□□□□ 0.17
APEX1-205ENST00000553555 TNKSO95271 1327 aa16.14■□□□□ 0.17
APEX1-205ENST00000553555 DDNO94850 711 aaPredicted RBP16.14■□□□□ 0.17
APEX1-205ENST00000553555 FAM83AQ86UY5 434 aa16.14■□□□□ 0.17
APEX1-205ENST00000553555 VEZTQ9HBM0 779 aa16.14■□□□□ 0.17
APEX1-205ENST00000553555 TCP11L1Q9NUJ3 509 aa16.14■□□□□ 0.17
APEX1-205ENST00000553555 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
APEX1-205ENST00000553555 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.14■□□□□ 0.17
APEX1-205ENST00000553555 CNTNAP1P78357 1384 aa16.14■□□□□ 0.17
APEX1-205ENST00000553555 SCRN1Q12765 414 aa16.13■□□□□ 0.17
APEX1-205ENST00000553555 KIF4BQ2VIQ3 1234 aa16.13■□□□□ 0.17
APEX1-205ENST00000553555 NFXL1Q6ZNB6 911 aa16.13■□□□□ 0.17
APEX1-205ENST00000553555 ENAHQ8N8S7 591 aaPredicted RBP16.13■□□□□ 0.17
APEX1-205ENST00000553555 NAP1L2Q9ULW6 460 aaPredicted RBP16.13■□□□□ 0.17
APEX1-205ENST00000553555 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 CCDC178Q5BJE1 867 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 APOA5Q6Q788 366 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
APEX1-205ENST00000553555 NEDD1Q8NHV4 660 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 NMT2O60551 498 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 SHMT1P34896 483 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 EPS15P42566 896 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 CCT2P78371 535 aaKnown RBP16.12■□□□□ 0.17
APEX1-205ENST00000553555 CHMP4CQ96CF2 233 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 DNAJC18Q9H819 358 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 IL17RBQ9NRM6 502 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
APEX1-205ENST00000553555 CIZ1Q9ULV3 898 aaPredicted RBP16.12■□□□□ 0.17
APEX1-205ENST00000553555 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
APEX1-205ENST00000553555 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 SLURP2P0DP57 97 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 TNNI2P48788 182 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 IFIT1BQ5T764 474 aaKnown RBP16.11■□□□□ 0.17
APEX1-205ENST00000553555 CRACR2BQ8N4Y2 399 aaPredicted RBP16.11■□□□□ 0.17
APEX1-205ENST00000553555 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 CSRNP1Q96S65 589 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 PGAP2Q9UHJ9 254 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 SMC3Q9UQE7 1217 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 SLC12A7Q9Y666 1083 aa16.11■□□□□ 0.17
APEX1-205ENST00000553555 ZBTB43O43298 467 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 RCSD1Q6JBY9 416 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 DPY19L2Q6NUT2 758 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 TATDN1Q6P1N9 297 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 SYNE3Q6ZMZ3 975 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 TRPM4Q8TD43 1214 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 LLPHQ9BRT6 129 aaKnown RBP16.1■□□□□ 0.17
APEX1-205ENST00000553555 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 HACL1Q9UJ83 578 aa16.1■□□□□ 0.17
APEX1-205ENST00000553555 ASTN2O75129 1339 aaPredicted RBP16.1■□□□□ 0.17
APEX1-205ENST00000553555 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
APEX1-205ENST00000553555 AKR1B1P15121 316 aa16.09■□□□□ 0.17
APEX1-205ENST00000553555 TNFAIP1Q13829 316 aa16.09■□□□□ 0.17
APEX1-205ENST00000553555 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
APEX1-205ENST00000553555 ZNF654Q8IZM8 581 aa16.09■□□□□ 0.17
APEX1-205ENST00000553555 TRIM34Q9BYJ4 488 aa16.09■□□□□ 0.17
APEX1-205ENST00000553555 NCOA5Q9HCD5 579 aaKnown RBP16.09■□□□□ 0.17
APEX1-205ENST00000553555 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
APEX1-205ENST00000553555 PLIN4Q96Q06 1357 aa16.09■□□□□ 0.17
APEX1-205ENST00000553555 FAM196BA6NMK8 535 aa16.08■□□□□ 0.17
APEX1-205ENST00000553555 CTDNEP1O95476 244 aa16.08■□□□□ 0.17
APEX1-205ENST00000553555 GJB2P29033 226 aa16.08■□□□□ 0.17
APEX1-205ENST00000553555 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.17
APEX1-205ENST00000553555 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.17
APEX1-205ENST00000553555 RCAN1P53805 252 aa16.08■□□□□ 0.17
APEX1-205ENST00000553555 HIRAP54198 1017 aaPredicted RBP16.08■□□□□ 0.17
APEX1-205ENST00000553555 RASA3Q14644 834 aa16.08■□□□□ 0.17
APEX1-205ENST00000553555 CCDC17Q96LX7 622 aa16.08■□□□□ 0.17
APEX1-205ENST00000553555 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.17
APEX1-205ENST00000553555 HERC5Q9UII4 1024 aaKnown RBP16.08■□□□□ 0.17
APEX1-205ENST00000553555 MYH6P13533 1939 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 NID2Q14112 1375 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
APEX1-205ENST00000553555 DTNBO60941 627 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 RXRAP19793 462 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 NOVP48745 357 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
APEX1-205ENST00000553555 CATIPQ7Z7H3 387 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 MICU3Q86XE3 530 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 NSUN7Q8NE18 718 aaKnown RBP16.08■□□□□ 0.16
APEX1-205ENST00000553555 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 MYL10Q9BUA6 226 aa16.08■□□□□ 0.16
APEX1-205ENST00000553555 ADARB2Q9NS39 739 aaKnown RBP16.08■□□□□ 0.16
APEX1-205ENST00000553555 FAM217BQ9NTX9 383 aaPredicted RBP16.08■□□□□ 0.16
APEX1-205ENST00000553555 IGKV6D-41A0A0C4DH26 115 aa16.07■□□□□ 0.16
APEX1-205ENST00000553555 GOLGA8AA7E2F4 631 aa16.07■□□□□ 0.16
APEX1-205ENST00000553555 TBC1D12O60347 775 aa16.07■□□□□ 0.16
APEX1-205ENST00000553555 CDC27P30260 824 aa16.07■□□□□ 0.16
APEX1-205ENST00000553555 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
APEX1-205ENST00000553555 CDAN1Q8IWY9 1227 aa16.07■□□□□ 0.16
APEX1-205ENST00000553555 CEP95Q96GE4 821 aa16.07■□□□□ 0.16
APEX1-205ENST00000553555 L3MBTL3Q96JM7 780 aaPredicted RBP16.07■□□□□ 0.16
APEX1-205ENST00000553555 TEPSINQ96N21 525 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms