RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 GTF2IRD1Q9UHL9 959 aa11.18□□□□□ -0.62
PCNX1-205ENST00000553508 UPK3BL1B0FP48 263 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 UPK3BL2E5RIL1 263 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 RBAK-RBAKDNI3L0D1 243 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 RECKO95980 971 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 CAP2P40123 477 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 OXCT1P55809 520 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 MPP2Q14168 576 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 LETMD1Q6P1Q0 360 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 NETO1Q8TDF5 533 aa11.17□□□□□ -0.62
PCNX1-205ENST00000553508 POLR3KQ9Y2Y1 108 aaPredicted RBP11.17□□□□□ -0.62
PCNX1-205ENST00000553508 GP2P55259 537 aaKnown RBP11.16□□□□□ -0.62
PCNX1-205ENST00000553508 FANCCQ00597 558 aa11.16□□□□□ -0.62
PCNX1-205ENST00000553508 SLC6A19Q695T7 634 aa11.16□□□□□ -0.62
PCNX1-205ENST00000553508 REC114Q7Z4M0 266 aa11.16□□□□□ -0.62
PCNX1-205ENST00000553508 CDH24Q86UP0 819 aa11.16□□□□□ -0.62
PCNX1-205ENST00000553508 MCATQ8IVS2 390 aaKnown RBP11.16□□□□□ -0.62
PCNX1-205ENST00000553508 MRPL41Q8IXM3 137 aaKnown RBP11.16□□□□□ -0.62
PCNX1-205ENST00000553508 PRDM5Q9NQX1 630 aaPredicted RBP11.16□□□□□ -0.62
PCNX1-205ENST00000553508 CNTNAP4Q9C0A0 1308 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 UNCXA6NJT0 531 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 GREM1O60565 184 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 CEACAM5P06731 702 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 ZNF394Q53GI3 561 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 USP48Q86UV5 1035 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 FAM13CQ8NE31 585 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 RNF34Q969K3 372 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 UBP1Q9NZI7 540 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 REV1Q9UBZ9 1251 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 KLHL3Q9UH77 587 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 ADAM30Q9UKF2 790 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 PCDHGB7Q9Y5F8 929 aa11.15□□□□□ -0.62
PCNX1-205ENST00000553508 BNIP3Q12983 259 aa11.14□□□□□ -0.63
PCNX1-205ENST00000553508 CWF19L2Q2TBE0 894 aaKnown RBP11.14□□□□□ -0.63
PCNX1-205ENST00000553508 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
PCNX1-205ENST00000553508 FLCNQ8NFG4 579 aa11.14□□□□□ -0.63
PCNX1-205ENST00000553508 BRMS1Q9HCU9 246 aa11.14□□□□□ -0.63
PCNX1-205ENST00000553508 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
PCNX1-205ENST00000553508 GNAT3A8MTJ3 354 aa11.13□□□□□ -0.63
PCNX1-205ENST00000553508 PRNPP04156 253 aa11.13□□□□□ -0.63
PCNX1-205ENST00000553508 CRKP46108 304 aa11.13□□□□□ -0.63
PCNX1-205ENST00000553508 TP53INP2Q8IXH6 220 aa11.13□□□□□ -0.63
PCNX1-205ENST00000553508 KCNQ5Q9NR82 932 aa11.13□□□□□ -0.63
PCNX1-205ENST00000553508 METTL5Q9NRN9 209 aaKnown RBP11.13□□□□□ -0.63
PCNX1-205ENST00000553508 KIAA1522Q9P206 1035 aaPredicted RBP11.13□□□□□ -0.63
PCNX1-205ENST00000553508 OAS3Q9Y6K5 1087 aaKnown RBP11.13□□□□□ -0.63
PCNX1-205ENST00000553508 HTR3BO95264 441 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 CBX7O95931 251 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 VAMP1P23763 118 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 IFI16Q16666 785 aaKnown RBP11.12□□□□□ -0.63
PCNX1-205ENST00000553508 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 ZNF574Q6ZN55 896 aaPredicted RBP11.12□□□□□ -0.63
PCNX1-205ENST00000553508 SPON2Q9BUD6 331 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 MKNK2Q9HBH9 465 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 ROBO2Q9HCK4 1378 aa11.12□□□□□ -0.63
PCNX1-205ENST00000553508 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
PCNX1-205ENST00000553508 CHURC1-FNTBB4DL54 471 aa11.11□□□□□ -0.63
PCNX1-205ENST00000553508 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCNX1-205ENST00000553508 SCAMP3O14828 347 aaKnown RBP11.11□□□□□ -0.63
PCNX1-205ENST00000553508 SFRP5Q5T4F7 317 aa11.11□□□□□ -0.63
PCNX1-205ENST00000553508 BCL7CQ8WUZ0 217 aaPredicted RBP11.11□□□□□ -0.63
PCNX1-205ENST00000553508 PCDHB14Q9Y5E9 798 aa11.11□□□□□ -0.63
PCNX1-205ENST00000553508 MCM4P33991 863 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 CD96P40200 585 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 APOBRQ0VD83 1088 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 AOC3Q16853 763 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 TMEM201Q5SNT2 666 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 C9orf131Q5VYM1 1079 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 KIAA0825Q8IV33 1275 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 MAPK8IP1Q9UQF2 711 aa11.1□□□□□ -0.63
PCNX1-205ENST00000553508 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
PCNX1-205ENST00000553508 YARSP54577 528 aaKnown RBP11.09□□□□□ -0.63
PCNX1-205ENST00000553508 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
PCNX1-205ENST00000553508 NKD1Q969G9 470 aa11.09□□□□□ -0.63
PCNX1-205ENST00000553508 PODXL2Q9NZ53 605 aa11.09□□□□□ -0.63
PCNX1-205ENST00000553508 PRR36Q9H6K5 1346 aa11.09□□□□□ -0.63
PCNX1-205ENST00000553508 FAM155AB1AL88 458 aaPredicted RBP11.08□□□□□ -0.64
PCNX1-205ENST00000553508 DNAJA2O60884 412 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 NKPD1Q17RQ9 610 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 CDKAL1Q5VV42 579 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 GK5Q6ZS86 529 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 EAF1Q96JC9 268 aaPredicted RBP11.08□□□□□ -0.64
PCNX1-205ENST00000553508 HRASLS5Q96KN8 279 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 FBXL18Q96ME1 805 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 LRRC3Q9BY71 257 aa11.08□□□□□ -0.64
PCNX1-205ENST00000553508 RACK1P63244 317 aaKnown RBP11.07□□□□□ -0.64
PCNX1-205ENST00000553508 PRKCQQ04759 706 aa11.07□□□□□ -0.64
PCNX1-205ENST00000553508 ZNF746Q6NUN9 644 aaPredicted RBP11.07□□□□□ -0.64
PCNX1-205ENST00000553508 SPACA3Q8IXA5 215 aa11.07□□□□□ -0.64
PCNX1-205ENST00000553508 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
PCNX1-205ENST00000553508 MISP3Q96FF7 219 aa11.07□□□□□ -0.64
PCNX1-205ENST00000553508 NT5C1AQ9BXI3 368 aa11.07□□□□□ -0.64
PCNX1-205ENST00000553508 PAK6Q9NQU5 681 aaPredicted RBP11.07□□□□□ -0.64
PCNX1-205ENST00000553508 VAV3Q9UKW4 847 aa11.07□□□□□ -0.64
PCNX1-205ENST00000553508 CD8BP10966 210 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 CYP7A1P22680 504 aa11.06□□□□□ -0.64
PCNX1-205ENST00000553508 MLECQ14165 292 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms