RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PCNTO95613 3336 aa17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 FAM155AB1AL88 458 aaPredicted RBP17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 TTLL12Q14166 644 aaPredicted RBP17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 STOX1Q6ZVD7 989 aa17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 SCYL3Q8IZE3 742 aa17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 PLIN4Q96Q06 1357 aa17.65■□□□□ 0.42
MTHFD1-204ENST00000553405 IGKV6D-41A0A0C4DH26 115 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 SPDYE5A6NIY4 337 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 ZNF213O14771 459 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 SLC27A2O14975 620 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 PRDM1O75626 825 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 GDF11O95390 407 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 AKR1B1P15121 316 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 COL9A3Q14050 684 aaPredicted RBP17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 AKNAD1Q5T1N1 836 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 RASAL3Q86YV0 1011 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 STK11IPQ8N1F8 1099 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 ZBTB21Q9ULJ3 1066 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 NEDD4P46934 1319 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 THSD7BQ9C0I4 1608 aa17.64■□□□□ 0.41
MTHFD1-204ENST00000553405 REC8O95072 547 aa17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 PTPRAP18433 802 aa17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 IMMTQ16891 758 aaKnown RBP17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 CERKLQ49MI3 558 aaPredicted RBP17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 RGMBQ6NW40 437 aa17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 SIAH1Q8IUQ4 282 aa17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 RASEFQ8IZ41 740 aa17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 ELP3Q9H9T3 547 aa17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 GINM1Q9NU53 330 aa17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 ABT1Q9ULW3 272 aaKnown RBP17.63■□□□□ 0.41
MTHFD1-204ENST00000553405 GH2P01242 217 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 SLC10A3P09131 477 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 HSPA4P34932 840 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 TSGA10IPQ3SY00 556 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 CCDC84Q86UT8 332 aaPredicted RBP17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 WNK4Q96J92 1243 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 CCDC17Q96LX7 622 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 TRIM34Q9BYJ4 488 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 CSADQ9Y600 493 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 PTPRFP10586 1907 aa17.62■□□□□ 0.41
MTHFD1-204ENST00000553405 ASNSP08243 561 aa17.61■□□□□ 0.41
MTHFD1-204ENST00000553405 NOVP48745 357 aa17.61■□□□□ 0.41
MTHFD1-204ENST00000553405 PDE4BQ07343 736 aa17.61■□□□□ 0.41
MTHFD1-204ENST00000553405 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
MTHFD1-204ENST00000553405 SPRYD7Q5W111 196 aa17.61■□□□□ 0.41
MTHFD1-204ENST00000553405 E7EWF7 191 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 PPIL2Q13356 520 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 SEPT2Q15019 361 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 ERO1BQ86YB8 467 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 CLEC10AQ8IUN9 316 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 DNAJC5GQ8N7S2 189 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 NEDD1Q8NHV4 660 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 OPTNQ96CV9 577 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 IL17RAQ96F46 866 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 MKNK2Q9HBH9 465 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 IL17RBQ9NRM6 502 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 KCNH4Q9UQ05 1017 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 AFG3L2Q9Y4W6 797 aa17.6■□□□□ 0.41
MTHFD1-204ENST00000553405 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 PPATQ06203 517 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 MOGSQ13724 837 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 DEFB115Q30KQ5 88 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 FAM47AQ5JRC9 791 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 CYP4F22Q6NT55 531 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 MFSD6Q6ZSS7 791 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 TMEM179Q6ZVK1 233 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 ZIC5Q96T25 663 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 ZNF287Q9HBT7 754 aa17.59■□□□□ 0.41
MTHFD1-204ENST00000553405 IRF6O14896 467 aa17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 ZBTB48P10074 688 aaPredicted RBP17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 TFAP4Q01664 338 aa17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 MB21D2Q8IYB1 491 aaPredicted RBP17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 MS4A4AQ96JQ5 239 aa17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 CAPNS2Q96L46 248 aa17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 PICK1Q9NRD5 415 aa17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 ZHX2Q9Y6X8 837 aa17.58■□□□□ 0.4
MTHFD1-204ENST00000553405 A0A1W2PRG0 241 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 USP17L5A8MUK1 530 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 B4E1Z4 1266 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 VEGFBP49765 207 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 NT5C2P49902 561 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 ADCK5Q3MIX3 580 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 ZNF444Q8N0Y2 327 aaPredicted RBP17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 ACER1Q8TDN7 264 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 CCDC102AQ96A19 550 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 OTUD5Q96G74 571 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 TCP11L1Q9NUJ3 509 aa17.57■□□□□ 0.4
MTHFD1-204ENST00000553405 LOC285556D6RIA3 1793 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms