RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 HHIPL2Q6UWX4 724 aa8.62□□□□□ -1.03
RDH11-203ENST00000553384 CDAN1Q8IWY9 1227 aa8.62□□□□□ -1.03
RDH11-203ENST00000553384 IL17RAQ96F46 866 aa8.62□□□□□ -1.03
RDH11-203ENST00000553384 ZDHHC15Q96MV8 337 aa8.62□□□□□ -1.03
RDH11-203ENST00000553384 WRNIP1Q96S55 665 aa8.62□□□□□ -1.03
RDH11-203ENST00000553384 RNF208Q9H0X6 261 aa8.62□□□□□ -1.03
RDH11-203ENST00000553384 GLRX3O76003 335 aaKnown RBP8.61□□□□□ -1.03
RDH11-203ENST00000553384 BAG4O95429 457 aaKnown RBP8.61□□□□□ -1.03
RDH11-203ENST00000553384 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
RDH11-203ENST00000553384 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
RDH11-203ENST00000553384 SLAIN1Q8ND83 568 aa8.61□□□□□ -1.03
RDH11-203ENST00000553384 PALD1Q9ULE6 856 aa8.61□□□□□ -1.03
RDH11-203ENST00000553384 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
RDH11-203ENST00000553384 COL6A3P12111 3177 aa8.61□□□□□ -1.03
RDH11-203ENST00000553384 RPAP1Q9BWH6 1393 aaPredicted RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 MYPNQ86TC9 1320 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 ADGRA2Q96PE1 1338 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 PDHXO00330 501 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 FARP2O94887 1054 aaPredicted RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 SGPL1O95470 568 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 CTGFP29279 349 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 GSTO1P78417 241 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 U2AF1L4Q8WU68 220 aaKnown RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 TMX3Q96JJ7 454 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 ZNF512BQ96KM6 892 aaPredicted RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 NOL10Q9BSC4 688 aaKnown RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 ECHDC1Q9NTX5 307 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 ZBTB22O15209 634 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 SGSM2O43147 1006 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 IDH1O75874 414 aaKnown RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 LDHCP07864 332 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 XRCC6P12956 609 aaKnown RBP eCLIP8.6□□□□□ -1.03
RDH11-203ENST00000553384 HSPA4P34932 840 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 ZAP70P43403 619 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 CACNB3P54284 484 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 FCGRTP55899 365 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 MECOMQ03112 1051 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 APOBEC3HQ6NTF7 200 aaKnown RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 ZKSCAN4Q969J2 545 aaPredicted RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 GPATCH3Q96I76 525 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 PARK7Q99497 189 aaKnown RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 DNAJC2Q99543 621 aaKnown RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 ZNF341Q9BYN7 854 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 IL25Q9H293 177 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 CPA4Q9UI42 421 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 ISY1Q9ULR0 285 aaKnown RBP8.6□□□□□ -1.03
RDH11-203ENST00000553384 DAGLAQ9Y4D2 1042 aa8.6□□□□□ -1.03
RDH11-203ENST00000553384 LAMA3Q16787 3333 aa8.59□□□□□ -1.03
RDH11-203ENST00000553384 EVI5O60447 810 aa8.59□□□□□ -1.03
RDH11-203ENST00000553384 BMP8BP34820 402 aa8.59□□□□□ -1.03
RDH11-203ENST00000553384 MRE11P49959 708 aa8.59□□□□□ -1.03
RDH11-203ENST00000553384 USP40Q9NVE5 1235 aa8.59□□□□□ -1.03
RDH11-203ENST00000553384 ZNF112Q9UJU3 913 aa8.59□□□□□ -1.03
RDH11-203ENST00000553384 CXCL11O14625 94 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 BCRP11274 1271 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 BTDP43251 543 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 MAP3K12Q12852 859 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 IRF5Q13568 498 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 CUL4AQ13619 759 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 PKP1Q13835 747 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 TTF1Q15361 905 aaPredicted RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 NAA16Q6N069 864 aaPredicted RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 CDC42EP5Q6NZY7 148 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 CWC27Q6UX04 472 aaKnown RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 NSUN4Q96CB9 384 aaKnown RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 INTS4Q96HW7 963 aaKnown RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 NDUFB9Q9Y6M9 179 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 MROH7-TTC4A0A0A0MT08 1334 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 RAD50Q92878 1312 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 BAG3O95817 575 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 PRKCZQ05513 592 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 TCP10Q12799 353 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 NOL9Q5SY16 702 aaKnown RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 MCTP1Q6DN14 999 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 RUFY2Q8WXA3 655 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 UPF3BQ9BZI7 483 aaKnown RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 LSG1Q9H089 658 aaKnown RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 BOLA2Q9H3K6 86 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 RTN4Q9NQC3 1192 aaKnown RBP8.58□□□□□ -1.04
RDH11-203ENST00000553384 DIAPH3Q9NSV4 1193 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 ZDHHC9Q9Y397 364 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 MYH2Q9UKX2 1941 aa8.58□□□□□ -1.04
RDH11-203ENST00000553384 GOLIM4O00461 696 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 PICALMQ13492 652 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 MOGSQ13724 837 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 KLHL40Q2TBA0 621 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 EVI5LQ96CN4 794 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 FAM163AQ96GL9 167 aaPredicted RBP8.57□□□□□ -1.04
RDH11-203ENST00000553384 UNC93B1Q9H1C4 597 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 PAK6Q9NQU5 681 aaPredicted RBP8.57□□□□□ -1.04
RDH11-203ENST00000553384 SLC45A1Q9Y2W3 748 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 DDX49Q9Y6V7 483 aaKnown RBP8.57□□□□□ -1.04
RDH11-203ENST00000553384 GAKO14976 1311 aa8.57□□□□□ -1.04
RDH11-203ENST00000553384 SOX1O00570 391 aaPredicted RBP8.56□□□□□ -1.04
RDH11-203ENST00000553384 ADCY3O60266 1144 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms