RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SLC9C1Q4G0N8 1177 aa15.66■□□□□ 0.1
ACTN1-207ENST00000553290 TREML2Q5T2D2 321 aa15.66■□□□□ 0.1
ACTN1-207ENST00000553290 ZSCAN25Q6NSZ9 544 aa15.66■□□□□ 0.1
ACTN1-207ENST00000553290 TATDN1Q6P1N9 297 aa15.66■□□□□ 0.1
ACTN1-207ENST00000553290 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
ACTN1-207ENST00000553290 ZBTB21Q9ULJ3 1066 aa15.66■□□□□ 0.1
ACTN1-207ENST00000553290 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
ACTN1-207ENST00000553290 TNRC18O15417 2968 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-207ENST00000553290 NAV1Q8NEY1 1877 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 MYH7P12883 1935 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 C19orf81C9J6K1 198 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 USP17L10C9JJH3 530 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 OSBPP22059 807 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 CTGFP29279 349 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 FCGRTP55899 365 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 JAG1P78504 1218 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 UBE3CQ15386 1083 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 TMOD4Q9NZQ9 345 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 SRRDQ9UH36 339 aa15.65■□□□□ 0.1
ACTN1-207ENST00000553290 MGAMO43451 1857 aa15.64■□□□□ 0.09
ACTN1-207ENST00000553290 PLCD1P51178 756 aa15.64■□□□□ 0.09
ACTN1-207ENST00000553290 MTMR2Q13614 643 aa15.64■□□□□ 0.09
ACTN1-207ENST00000553290 CERKLQ49MI3 558 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-207ENST00000553290 DDX60LQ5H9U9 1706 aaKnown RBP15.64■□□□□ 0.09
ACTN1-207ENST00000553290 LCORLQ8N3X6 602 aa15.64■□□□□ 0.09
ACTN1-207ENST00000553290 ZNF333Q96JL9 665 aa15.64■□□□□ 0.09
ACTN1-207ENST00000553290 ARMT1Q9H993 441 aa15.64■□□□□ 0.09
ACTN1-207ENST00000553290 DCP1AQ9NPI6 582 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-207ENST00000553290 MCM9Q9NXL9 1143 aa15.64■□□□□ 0.09
ACTN1-207ENST00000553290 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-207ENST00000553290 MBD4O95243 580 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 GH2P01242 217 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-207ENST00000553290 FAM110CQ1W6H9 321 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 SHROOM1Q2M3G4 852 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-207ENST00000553290 SDR42E1Q8WUS8 393 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 TMEM106CQ9BVX2 250 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 CABP5Q9NP86 173 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 ATP8A2Q9NTI2 1148 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 TAOK2Q9UL54 1235 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 MYPNQ86TC9 1320 aa15.63■□□□□ 0.09
ACTN1-207ENST00000553290 RBBP6Q7Z6E9 1792 aaKnown RBP15.62■□□□□ 0.09
ACTN1-207ENST00000553290 HOXA7P31268 230 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-207ENST00000553290 SHMT1P34896 483 aa15.62■□□□□ 0.09
ACTN1-207ENST00000553290 GABPAQ06546 454 aa15.62■□□□□ 0.09
ACTN1-207ENST00000553290 ABCB5Q2M3G0 1257 aa15.62■□□□□ 0.09
ACTN1-207ENST00000553290 ANKRD13CQ8N6S4 541 aa15.62■□□□□ 0.09
ACTN1-207ENST00000553290 RAET1EQ8TD07 263 aa15.62■□□□□ 0.09
ACTN1-207ENST00000553290 CRBNQ96SW2 442 aa15.62■□□□□ 0.09
ACTN1-207ENST00000553290 ASCC2Q9H1I8 757 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-207ENST00000553290 IRX3P78415 501 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-207ENST00000553290 SLFNL1Q499Z3 407 aa15.61■□□□□ 0.09
ACTN1-207ENST00000553290 USP17L2Q6R6M4 530 aa15.61■□□□□ 0.09
ACTN1-207ENST00000553290 AMOTL1Q8IY63 956 aa15.61■□□□□ 0.09
ACTN1-207ENST00000553290 KBTBD3Q8NAB2 608 aa15.61■□□□□ 0.09
ACTN1-207ENST00000553290 DDRGK1Q96HY6 314 aa15.61■□□□□ 0.09
ACTN1-207ENST00000553290 TTC41PQ6P2S7 1318 aa15.61■□□□□ 0.09
ACTN1-207ENST00000553290 KIAA0100Q14667 2235 aaKnown RBP15.6■□□□□ 0.09
ACTN1-207ENST00000553290 POTEFA5A3E0 1075 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 TNPO2O14787 897 aaKnown RBP15.6■□□□□ 0.09
ACTN1-207ENST00000553290 ERC2O15083 957 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 PRKAB2O43741 272 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 GRK4P32298 578 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 USP14P54578 494 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 PRKCZQ05513 592 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 AAMPQ13685 434 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 RAB3GAP1Q15042 981 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 SH3TC2Q8TF17 1288 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-207ENST00000553290 SWAP70Q9UH65 585 aa15.6■□□□□ 0.09
ACTN1-207ENST00000553290 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
ACTN1-207ENST00000553290 COA7Q96BR5 231 aa15.59■□□□□ 0.09
ACTN1-207ENST00000553290 C12orf42Q96LP6 360 aa15.59■□□□□ 0.09
ACTN1-207ENST00000553290 FEZ1Q99689 392 aa15.59■□□□□ 0.09
ACTN1-207ENST00000553290 PUS7LQ9H0K6 701 aaKnown RBP15.59■□□□□ 0.09
ACTN1-207ENST00000553290 SLC4A4Q9Y6R1 1079 aa15.59■□□□□ 0.09
ACTN1-207ENST00000553290 BAZ2AQ9UIF9 1905 aaKnown RBP15.58■□□□□ 0.09
ACTN1-207ENST00000553290 CHGBP05060 677 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 ZFYP08048 801 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-207ENST00000553290 C12orf60Q5U649 245 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 TSHZ3Q63HK5 1081 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 SLAIN1Q8ND83 568 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 GTF3C2Q8WUA4 911 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-207ENST00000553290 GCC1Q96CN9 775 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 P2RX7Q99572 595 aaKnown RBP15.58■□□□□ 0.08
ACTN1-207ENST00000553290 KIAA1683Q9H0B3 1180 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 MORF4L1Q9UBU8 362 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 GABRQQ9UN88 632 aa15.58■□□□□ 0.08
ACTN1-207ENST00000553290 MYH8P13535 1937 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L12C9JPN9 530 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L21D6R901 530 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 MPHOSPH10O00566 681 aaKnown RBP15.57■□□□□ 0.08
ACTN1-207ENST00000553290 RNF113AO15541 343 aaKnown RBP15.57■□□□□ 0.08
ACTN1-207ENST00000553290 GLRX3O76003 335 aaKnown RBP15.57■□□□□ 0.08
ACTN1-207ENST00000553290 CYP2D6P10635 497 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 GUCY1A2P33402 732 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 FLT3LGP49771 235 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 HERVK_113P62684 666 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 EVX2Q03828 476 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms