RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 GH2P01242 217 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 POLR3DP05423 398 aaPredicted RBP19.24■□□□□ 0.67
CDK4-215ENST00000553237 PLCD1P51178 756 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 SH3D19Q5HYK7 790 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 LCORLQ8N3X6 602 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 RAET1EQ8TD07 263 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 TMEM106CQ9BVX2 250 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 CRNKL1Q9BZJ0 848 aaKnown RBP19.24■□□□□ 0.67
CDK4-215ENST00000553237 DCTPP1Q9H773 170 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 SERPINB13Q9UIV8 391 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 PNMA3Q9UL41 463 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 MYPNQ86TC9 1320 aa19.24■□□□□ 0.67
CDK4-215ENST00000553237 ATAD5Q96QE3 1844 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 CHGBP05060 677 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 BACE1P56817 501 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 PRKCZQ05513 592 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 PABPC4Q13310 644 aaKnown RBP eCLIP19.23■□□□□ 0.674e-12■■■□□ 17.5
CDK4-215ENST00000553237 TATDN1Q6P1N9 297 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 SDR42E1Q8WUS8 393 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 ASCC2Q9H1I8 757 aaPredicted RBP19.23■□□□□ 0.67
CDK4-215ENST00000553237 ARMT1Q9H993 441 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 GINM1Q9NU53 330 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
CDK4-215ENST00000553237 KIAA0100Q14667 2235 aaKnown RBP19.23■□□□□ 0.67
CDK4-215ENST00000553237 MYH1P12882 1939 aa19.22■□□□□ 0.67
CDK4-215ENST00000553237 ADD2P35612 726 aa19.22■□□□□ 0.67
CDK4-215ENST00000553237 EVX2Q03828 476 aa19.22■□□□□ 0.67
CDK4-215ENST00000553237 EHD4Q9H223 541 aa19.22■□□□□ 0.67
CDK4-215ENST00000553237 MCM9Q9NXL9 1143 aa19.22■□□□□ 0.67
CDK4-215ENST00000553237 GABRQQ9UN88 632 aa19.22■□□□□ 0.67
CDK4-215ENST00000553237 PCDHB15Q9Y5E8 787 aa19.22■□□□□ 0.67
CDK4-215ENST00000553237 USP17L10C9JJH3 530 aa19.21■□□□□ 0.67
CDK4-215ENST00000553237 RRP1P56182 461 aaKnown RBP19.21■□□□□ 0.67
CDK4-215ENST00000553237 CERKLQ49MI3 558 aaPredicted RBP19.21■□□□□ 0.67
CDK4-215ENST00000553237 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDK4-215ENST00000553237 ECHDC1Q9NTX5 307 aa19.21■□□□□ 0.67
CDK4-215ENST00000553237 TNRC18O15417 2968 aaPredicted RBP19.2■□□□□ 0.66
CDK4-215ENST00000553237 C19orf81C9J6K1 198 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 TNPO2O14787 897 aaKnown RBP19.2■□□□□ 0.66
CDK4-215ENST00000553237 PRKAB2O43741 272 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 MBD4O95243 580 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 CYP2D6P10635 497 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 GRK4P32298 578 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 SHMT1P34896 483 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 RAB3GAP1Q15042 981 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 ABCB5Q2M3G0 1257 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 TSHZ3Q63HK5 1081 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 DCP1AQ9NPI6 582 aaPredicted RBP19.2■□□□□ 0.66
CDK4-215ENST00000553237 PDE4DIPQ5VU43 2346 aa19.2■□□□□ 0.66
CDK4-215ENST00000553237 GCLCP48506 637 aaPredicted RBP19.19■□□□□ 0.66
CDK4-215ENST00000553237 IRX3P78415 501 aaPredicted RBP19.19■□□□□ 0.66
CDK4-215ENST00000553237 MTFR1Q15390 333 aa19.19■□□□□ 0.66
CDK4-215ENST00000553237 ZYXQ15942 572 aaKnown RBP19.19■□□□□ 0.66
CDK4-215ENST00000553237 FAM110CQ1W6H9 321 aa19.19■□□□□ 0.66
CDK4-215ENST00000553237 P2RX7Q99572 595 aaKnown RBP19.19■□□□□ 0.66
CDK4-215ENST00000553237 BIN2Q9UBW5 565 aaPredicted RBP19.19■□□□□ 0.66
CDK4-215ENST00000553237 CENPFP49454 3210 aa19.19■□□□□ 0.66
CDK4-215ENST00000553237 FLT3LGP49771 235 aa19.18■□□□□ 0.66
CDK4-215ENST00000553237 GABPAQ06546 454 aa19.18■□□□□ 0.66
CDK4-215ENST00000553237 USP17L2Q6R6M4 530 aa19.18■□□□□ 0.66
CDK4-215ENST00000553237 FEZ1Q99689 392 aa19.18■□□□□ 0.66
CDK4-215ENST00000553237 CABP5Q9NP86 173 aa19.18■□□□□ 0.66
CDK4-215ENST00000553237 EMILIN3Q9NT22 766 aa19.18■□□□□ 0.66
CDK4-215ENST00000553237 LOC285556D6RIA3 1793 aa19.18■□□□□ 0.66
CDK4-215ENST00000553237 PEX10O60683 326 aa19.17■□□□□ 0.66
CDK4-215ENST00000553237 HOXA7P31268 230 aaPredicted RBP19.17■□□□□ 0.66
CDK4-215ENST00000553237 UBE3CQ15386 1083 aa19.17■□□□□ 0.66
CDK4-215ENST00000553237 SLC44A5Q8NCS7 719 aa19.17■□□□□ 0.66
CDK4-215ENST00000553237 ACER1Q8TDN7 264 aa19.17■□□□□ 0.66
CDK4-215ENST00000553237 CRBNQ96SW2 442 aa19.17■□□□□ 0.66
CDK4-215ENST00000553237 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
CDK4-215ENST00000553237 ADCY3O60266 1144 aa19.16■□□□□ 0.66
CDK4-215ENST00000553237 COA7Q96BR5 231 aa19.16■□□□□ 0.66
CDK4-215ENST00000553237 DYNLL2Q96FJ2 89 aa19.16■□□□□ 0.66
CDK4-215ENST00000553237 GPATCH3Q96I76 525 aa19.16■□□□□ 0.66
CDK4-215ENST00000553237 CYP2D7A0A087X1C5 515 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 SMIM22K7EJ46 135 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 MPHOSPH10O00566 681 aaKnown RBP19.15■□□□□ 0.66
CDK4-215ENST00000553237 ELNP15502 786 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 GUCY1A2P33402 732 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 HERVK_113P62684 666 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 SEPT2Q15019 361 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 ZSCAN25Q6NSZ9 544 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 SLAIN1Q8ND83 568 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 PUS7LQ9H0K6 701 aaKnown RBP19.15■□□□□ 0.66
CDK4-215ENST00000553237 ATP8A2Q9NTI2 1148 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 SLC4A4Q9Y6R1 1079 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 MGAMO43451 1857 aa19.15■□□□□ 0.66
CDK4-215ENST00000553237 NAV1Q8NEY1 1877 aa19.14■□□□□ 0.65
CDK4-215ENST00000553237 CCL5P13501 91 aa19.14■□□□□ 0.65
CDK4-215ENST00000553237 UBXN2AP68543 259 aa19.14■□□□□ 0.65
CDK4-215ENST00000553237 TXNRD2Q9NNW7 524 aa19.14■□□□□ 0.65
CDK4-215ENST00000553237 MORF4L1Q9UBU8 362 aa19.14■□□□□ 0.65
CDK4-215ENST00000553237 USP17L12C9JPN9 530 aa19.13■□□□□ 0.65
CDK4-215ENST00000553237 USP17L21D6R901 530 aa19.13■□□□□ 0.65
CDK4-215ENST00000553237 IRF5Q13568 498 aa19.13■□□□□ 0.65
CDK4-215ENST00000553237 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
CDK4-215ENST00000553237 OTUD7AQ8TE49 926 aaPredicted RBP19.13■□□□□ 0.65
CDK4-215ENST00000553237 KIAA1683Q9H0B3 1180 aa19.13■□□□□ 0.65
CDK4-215ENST00000553237 RNF208Q9H0X6 261 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms