RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 CCDC88AQ3V6T2 1871 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 A0A1B0GVL5 298 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 PPFIA3O75145 1194 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 TADA3O75528 432 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 ZFYP08048 801 aaPredicted RBP8.4□□□□□ -1.06
BEST3-212ENST00000553096 CMA1P23946 247 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 SF3B2Q13435 895 aaKnown RBP8.4□□□□□ -1.06
BEST3-212ENST00000553096 RASGRF1Q13972 1273 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 FAM196AQ6ZSG2 479 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 GPR161Q8N6U8 529 aaKnown RBP8.4□□□□□ -1.06
BEST3-212ENST00000553096 JMYQ8N9B5 988 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 C8orf76Q96K31 380 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 EFCC1Q9HA90 598 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 TACC3Q9Y6A5 838 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 ARHGAP6O43182 974 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 ZNF202O95125 648 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 PLA2G4AP47712 749 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 FOSBP53539 338 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 CCT2P78371 535 aaKnown RBP8.4□□□□□ -1.06
BEST3-212ENST00000553096 MYL5Q02045 173 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 EN1Q05925 392 aaPredicted RBP8.4□□□□□ -1.06
BEST3-212ENST00000553096 MUM1L1Q5H9M0 696 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 TMX1Q9H3N1 280 aa8.4□□□□□ -1.06
BEST3-212ENST00000553096 ZNF532Q9HCE3 1301 aa8.4□□□□□ -1.07
BEST3-212ENST00000553096 NPHP1O15259 732 aa8.4□□□□□ -1.07
BEST3-212ENST00000553096 PDE6AP16499 860 aa8.4□□□□□ -1.07
BEST3-212ENST00000553096 NCAPHQ15003 741 aa8.4□□□□□ -1.07
BEST3-212ENST00000553096 DNAJC21Q5F1R6 531 aaKnown RBP8.4□□□□□ -1.07
BEST3-212ENST00000553096 MYSM1Q5VVJ2 828 aa8.4□□□□□ -1.07
BEST3-212ENST00000553096 TBC1D10CQ8IV04 446 aa8.4□□□□□ -1.07
BEST3-212ENST00000553096 LPIN2Q92539 896 aa8.4□□□□□ -1.07
BEST3-212ENST00000553096 CWC15Q9P013 229 aaKnown RBP8.4□□□□□ -1.07
BEST3-212ENST00000553096 CDK5RAP2Q96SN8 1893 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 URI1O94763 535 aaPredicted RBP8.39□□□□□ -1.07
BEST3-212ENST00000553096 SERPINC1P01008 464 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 TOP1P11387 765 aaKnown RBP8.39□□□□□ -1.07
BEST3-212ENST00000553096 SSR1P43307 286 aaKnown RBP8.39□□□□□ -1.07
BEST3-212ENST00000553096 UBASH3AP57075 661 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 TUBB4BP68371 445 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 ERFEQ4G0M1 354 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 SLC9C2Q5TAH2 1124 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 OLFM4Q6UX06 510 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 EPB41L4AQ9HCS5 686 aaPredicted RBP8.39□□□□□ -1.07
BEST3-212ENST00000553096 TUBE1Q9UJT0 475 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 HPS5Q9UPZ3 1129 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 APBA3O96018 575 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 ANO1Q5XXA6 986 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 TRIM65Q6PJ69 517 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 VSTM4Q8IW00 320 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 FBXO18Q8NFZ0 1043 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 FBXW7Q969H0 707 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 NCAPGQ9BPX3 1015 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 UBXN6Q9BZV1 441 aa8.39□□□□□ -1.07
BEST3-212ENST00000553096 WDR19Q8NEZ3 1342 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 IDH1O75874 414 aaKnown RBP8.38□□□□□ -1.07
BEST3-212ENST00000553096 FDPSP14324 419 aaKnown RBP8.38□□□□□ -1.07
BEST3-212ENST00000553096 CASQ1P31415 396 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 BCAMP50895 628 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 GUCY1B3Q02153 619 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 ZKSCAN8Q15776 578 aaPredicted RBP8.38□□□□□ -1.07
BEST3-212ENST00000553096 SPATA5Q8NB90 893 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 ST7Q9NRC1 585 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 HOOK1Q9UJC3 728 aaKnown RBP8.38□□□□□ -1.07
BEST3-212ENST00000553096 CLIC4Q9Y696 253 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 NEDD4P46934 1319 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 CNTNAP4Q9C0A0 1308 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 POTEB2H3BUK9 544 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 PPP6R2O75170 966 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 PFKFB1P16118 471 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 HNRNPH2P55795 449 aaKnown RBP8.38□□□□□ -1.07
BEST3-212ENST00000553096 CHRNDQ07001 517 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 UBE3CQ15386 1083 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 TBC1D9BQ66K14 1250 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 CYB5R4Q7L1T6 521 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 SLC51AQ86UW1 340 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 REXO1L1PQ8IX06 675 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 ELOA2Q8IYF1 753 aaPredicted RBP8.38□□□□□ -1.07
BEST3-212ENST00000553096 EXOC8Q8IYI6 725 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 RABGGTAQ92696 567 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
BEST3-212ENST00000553096 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 ARFGAP3Q9NP61 516 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 INCENPQ9NQS7 918 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 PSD3Q9NYI0 1048 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
BEST3-212ENST00000553096 A0A087WWV3 80 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 CPLX1O14810 134 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 PRC1O43663 620 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 SLC5A1P13866 664 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
BEST3-212ENST00000553096 SYKP43405 635 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 SLC39A14Q15043 492 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 IMMTQ16891 758 aaKnown RBP8.37□□□□□ -1.07
BEST3-212ENST00000553096 CCDC152Q4G0S7 254 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 RAB11FIP4Q86YS3 637 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 CCDC125Q86Z20 511 aa8.37□□□□□ -1.07
BEST3-212ENST00000553096 STRBPQ96SI9 672 aaKnown RBP8.37□□□□□ -1.07
BEST3-212ENST00000553096 CARD6Q9BX69 1037 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms