RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 TRIM32Q13049 653 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 IRF5Q13568 498 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 FAM110CQ1W6H9 321 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 CEP85Q6P2H3 762 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
LINC00661-207ENST00000552685 P2RX7Q99572 595 aaKnown RBP12.12□□□□□ -0.47
LINC00661-207ENST00000552685 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 DHX36Q9H2U1 1008 aaKnown RBP12.12□□□□□ -0.47
LINC00661-207ENST00000552685 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 TFRCP02786 760 aaKnown RBP12.11□□□□□ -0.47
LINC00661-207ENST00000552685 BACE1P56817 501 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 SH3D19Q5HYK7 790 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 MAGEB6Q8N7X4 407 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
LINC00661-207ENST00000552685 WDR18Q9BV38 432 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 MYH1P12882 1939 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 PLXNB2O15031 1838 aa12.11□□□□□ -0.47
LINC00661-207ENST00000552685 GCLCP48506 637 aaPredicted RBP12.1□□□□□ -0.47
LINC00661-207ENST00000552685 IRX3P78415 501 aaPredicted RBP12.1□□□□□ -0.47
LINC00661-207ENST00000552685 PABPC4Q13310 644 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00661-207ENST00000552685 AACSQ86V21 672 aa12.1□□□□□ -0.47
LINC00661-207ENST00000552685 METTL16Q86W50 562 aaKnown RBP12.1□□□□□ -0.47
LINC00661-207ENST00000552685 FOXP4Q8IVH2 680 aaPredicted RBP12.1□□□□□ -0.47
LINC00661-207ENST00000552685 DIS3LQ8TF46 1054 aaKnown RBP12.1□□□□□ -0.47
LINC00661-207ENST00000552685 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
LINC00661-207ENST00000552685 TXNRD2Q9NNW7 524 aa12.1□□□□□ -0.47
LINC00661-207ENST00000552685 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
LINC00661-207ENST00000552685 TMOD4Q9NZQ9 345 aa12.1□□□□□ -0.47
LINC00661-207ENST00000552685 GJD2Q9UKL4 321 aa12.1□□□□□ -0.47
LINC00661-207ENST00000552685 APBB1O00213 710 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 GH2P01242 217 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 HLA-DOAP06340 250 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 ASNSP08243 561 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 USP5P45974 858 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 EVX2Q03828 476 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 ZYXQ15942 572 aaKnown RBP12.09□□□□□ -0.47
LINC00661-207ENST00000552685 POTEEQ6S8J3 1075 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
LINC00661-207ENST00000552685 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00661-207ENST00000552685 PAK6Q9NQU5 681 aaPredicted RBP12.09□□□□□ -0.47
LINC00661-207ENST00000552685 USP17L10C9JJH3 530 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 CYP2B6P20813 491 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
LINC00661-207ENST00000552685 HERVK_113P62684 666 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 Q3C1V9 767 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 LRCH3Q96II8 777 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 PAWRQ96IZ0 340 aaKnown RBP12.08□□□□□ -0.48
LINC00661-207ENST00000552685 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 MORF4L1Q9UBU8 362 aa12.08□□□□□ -0.48
LINC00661-207ENST00000552685 HMGCRP04035 888 aa12.07□□□□□ -0.48
LINC00661-207ENST00000552685 HOXA7P31268 230 aaPredicted RBP12.07□□□□□ -0.48
LINC00661-207ENST00000552685 DIEXFQ68CQ4 756 aaKnown RBP12.07□□□□□ -0.48
LINC00661-207ENST00000552685 GPRC5AQ8NFJ5 357 aa12.07□□□□□ -0.48
LINC00661-207ENST00000552685 TRIB2Q92519 343 aa12.07□□□□□ -0.48
LINC00661-207ENST00000552685 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
LINC00661-207ENST00000552685 PORCNQ9H237 461 aa12.07□□□□□ -0.48
LINC00661-207ENST00000552685 RBPJLQ9UBG7 517 aa12.07□□□□□ -0.48
LINC00661-207ENST00000552685 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 PLCD1P51178 756 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 RAB3GAP1Q15042 981 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 ACER1Q8TDN7 264 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 EDC3Q96F86 508 aaKnown RBP12.06□□□□□ -0.48
LINC00661-207ENST00000552685 FEZ1Q99689 392 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 NR2E3Q9Y5X4 410 aa12.06□□□□□ -0.48
LINC00661-207ENST00000552685 EVI5O60447 810 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 PDE6AP16499 860 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 ERVK-9P63128 1117 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 ERVK-24P63145 666 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 CCL14Q16627 93 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 SLFNL1Q499Z3 407 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 TATDN1Q6P1N9 297 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 ERC1Q8IUD2 1116 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 DNAJC2Q99543 621 aaKnown RBP12.05□□□□□ -0.48
LINC00661-207ENST00000552685 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
LINC00661-207ENST00000552685 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 NAV1Q8NEY1 1877 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 CUL9Q8IWT3 2517 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 ZBED9Q6R2W3 1325 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
LINC00661-207ENST00000552685 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
LINC00661-207ENST00000552685 MAGEB6P1A0A0J9YX57 407 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 GOLIM4O00461 696 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 CNMDO75829 334 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 CYP2D6P10635 497 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
LINC00661-207ENST00000552685 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 SHMT1P34896 483 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 ABCB5Q2M3G0 1257 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 CERKLQ49MI3 558 aaPredicted RBP12.04□□□□□ -0.48
LINC00661-207ENST00000552685 GPR142Q7Z601 462 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 NECAB2Q7Z6G3 386 aa12.04□□□□□ -0.48
LINC00661-207ENST00000552685 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms