RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 PI4KBQ9UBF8 816 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 ZNF70Q9UC06 446 aaPredicted RBP12.81□□□□□ -0.36
LINC00661-206ENST00000552608 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
LINC00661-206ENST00000552608 GOLGA8AA7E2F4 631 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 RASA1P20936 1047 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 PRELPP51888 382 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
LINC00661-206ENST00000552608 SCRN1Q12765 414 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 TCP10Q12799 353 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 NFIAQ12857 509 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 GPR162Q16538 588 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 APOA5Q6Q788 366 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 CATIPQ7Z7H3 387 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 DGKHQ86XP1 1220 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 FAM151AQ8WW52 585 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 VEZTQ9HBM0 779 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
LINC00661-206ENST00000552608 BRPF3Q9ULD4 1205 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 PCDHAC2Q9Y5I4 1007 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 SIPA1L1O43166 1804 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 NID2Q14112 1375 aa12.8□□□□□ -0.36
LINC00661-206ENST00000552608 DDAH1O94760 285 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 CACNB3P54284 484 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 GABPAQ06546 454 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 SEC23AQ15436 765 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 FAM83AQ86UY5 434 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 MICU3Q86XE3 530 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
LINC00661-206ENST00000552608 KAT14Q9H8E8 782 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
LINC00661-206ENST00000552608 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
LINC00661-206ENST00000552608 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
LINC00661-206ENST00000552608 MYH6P13533 1939 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 SMIM22K7EJ46 135 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 WNT10BO00744 389 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00661-206ENST00000552608 LMOD1P29536 600 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-206ENST00000552608 EVX2Q03828 476 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 ST3GAL1Q11201 340 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 RAB3GAP1Q15042 981 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 ENAHQ8N8S7 591 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-206ENST00000552608 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 GBP4Q96PP9 640 aa12.78□□□□□ -0.36
LINC00661-206ENST00000552608 RBM28Q9NW13 759 aaKnown RBP12.78□□□□□ -0.36
LINC00661-206ENST00000552608 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
LINC00661-206ENST00000552608 ZC3H4Q9UPT8 1303 aaKnown RBP12.78□□□□□ -0.36
LINC00661-206ENST00000552608 PTPDC1A2A3K4 754 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 DDTLA6NHG4 134 aaPredicted RBP12.77□□□□□ -0.37
LINC00661-206ENST00000552608 RTN1Q16799 776 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 KIF4BQ2VIQ3 1234 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
LINC00661-206ENST00000552608 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.37
LINC00661-206ENST00000552608 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 SLC44A5Q8NCS7 719 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
LINC00661-206ENST00000552608 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.37
LINC00661-206ENST00000552608 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 NUP133Q8WUM0 1156 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 ANKS1AQ92625 1134 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 CSRNP1Q96S65 589 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 GREB1LQ9C091 1923 aaPredicted RBP12.77□□□□□ -0.37
LINC00661-206ENST00000552608 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
LINC00661-206ENST00000552608 SOCS7O14512 581 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 STX6O43752 255 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 C9orf131Q5VYM1 1079 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
LINC00661-206ENST00000552608 WASF1Q92558 559 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 MAP3K14Q99558 947 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
LINC00661-206ENST00000552608 CABP5Q9NP86 173 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 HPS5Q9UPZ3 1129 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 ATP6V1DQ9Y5K8 247 aa12.76□□□□□ -0.37
LINC00661-206ENST00000552608 H3BQV1 296 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 MPHOSPH10O00566 681 aaKnown RBP12.75□□□□□ -0.37
LINC00661-206ENST00000552608 BRD1O95696 1058 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 TOP1P11387 765 aaKnown RBP12.75□□□□□ -0.37
LINC00661-206ENST00000552608 PTMSP20962 102 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 SYT1P21579 422 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 KIF5BP33176 963 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 SHMT1P34896 483 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 NBPF9Q3BBW0 867 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
LINC00661-206ENST00000552608 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
LINC00661-206ENST00000552608 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 METTL16Q86W50 562 aaKnown RBP12.75□□□□□ -0.37
LINC00661-206ENST00000552608 ZFPM1Q8IX07 1006 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms