RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 ERC2O15083 957 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 GDF11O95390 407 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 HLA-DOAP06340 250 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 ELNP15502 786 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 PABPC4Q13310 644 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 MTMR2Q13614 643 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 MAGEB6Q8N7X4 407 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 NKX2-3Q8TAU0 364 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 COA7Q96BR5 231 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
SMARCC2-212ENST00000552566 MX1P20591 662 aa16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 USP5P45974 858 aa16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 JAG1P78504 1218 aa16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 UNC93B1Q9H1C4 597 aa16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 TMOD4Q9NZQ9 345 aa16.79■□□□□ 0.28
SMARCC2-212ENST00000552566 TTC41PQ6P2S7 1318 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 INHAP05111 366 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 GJB1P08034 283 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 ASNSP08243 561 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 IRX3P78415 501 aaPredicted RBP16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 FAM110CQ1W6H9 321 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 DPF3Q92784 378 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 DNAJC18Q9H819 358 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 ECHDC1Q9NTX5 307 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 CENPFP49454 3210 aa16.78■□□□□ 0.28
SMARCC2-212ENST00000552566 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.28
SMARCC2-212ENST00000552566 IGSF3O75054 1194 aa16.77■□□□□ 0.28
SMARCC2-212ENST00000552566 GJA8P48165 433 aa16.77■□□□□ 0.28
SMARCC2-212ENST00000552566 BACE1P56817 501 aa16.77■□□□□ 0.28
SMARCC2-212ENST00000552566 SH3D19Q5HYK7 790 aa16.77■□□□□ 0.28
SMARCC2-212ENST00000552566 U2AF1L4Q8WU68 220 aaKnown RBP16.77■□□□□ 0.28
SMARCC2-212ENST00000552566 WDR18Q9BV38 432 aa16.77■□□□□ 0.28
SMARCC2-212ENST00000552566 PDE4DIPQ5VU43 2346 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 MYH2Q9UKX2 1941 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 H0YGN5 161 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 GLRX3O76003 335 aaKnown RBP16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 PDE4AP27815 886 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 PDE1AP54750 535 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 PXYLP1Q8TE99 480 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 ZBTB21Q9ULJ3 1066 aa16.76■□□□□ 0.27
SMARCC2-212ENST00000552566 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 AK9Q5TCS8 1911 aa16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 IRF5Q13568 498 aa16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 METTL16Q86W50 562 aaKnown RBP16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 P2RX7Q99572 595 aaKnown RBP16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 STAP2Q9UGK3 403 aa16.75■□□□□ 0.27
SMARCC2-212ENST00000552566 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 C19orf81C9J6K1 198 aa16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 PEX10O60683 326 aa16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 GH2P01242 217 aa16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 DEFB118Q96PH6 123 aa16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 OSBPL3Q9H4L5 887 aa16.74■□□□□ 0.27
SMARCC2-212ENST00000552566 FARP2O94887 1054 aaPredicted RBP16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 SGPL1O95470 568 aa16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 ATP5JP18859 108 aa16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 ZYXQ15942 572 aaKnown RBP16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 FEZ1Q99689 392 aa16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 HTATIP2Q9BUP3 242 aa16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 GINM1Q9NU53 330 aa16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 COLQQ9Y215 455 aaPredicted RBP16.73■□□□□ 0.27
SMARCC2-212ENST00000552566 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 GOLIM4O00461 696 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 POLR3DP05423 398 aaPredicted RBP16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 HERVK_113P62684 666 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 TTF1Q15361 905 aaPredicted RBP16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 CCAR1Q8IX12 1150 aaKnown RBP16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 BRCA2P51587 3418 aa16.72■□□□□ 0.27
SMARCC2-212ENST00000552566 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 USP17L2Q6R6M4 530 aa16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 SKAP1Q86WV1 359 aa16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 PAGR1Q9BTK6 254 aa16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 BOLA2Q9H3K6 86 aa16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 MORF4L1Q9UBU8 362 aa16.71■□□□□ 0.27
SMARCC2-212ENST00000552566 DOCK1Q14185 1865 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 HMGCRP04035 888 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 PDE6AP16499 860 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 CYP2B6P20813 491 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 PLCD1P51178 756 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms