RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-215ENST00000552555 RAB11FIP4Q86YS3 637 aa11.97□□□□□ -0.49
DDX23-215ENST00000552555 TRIM22Q8IYM9 498 aa11.97□□□□□ -0.49
DDX23-215ENST00000552555 ZDHHC15Q96MV8 337 aa11.97□□□□□ -0.49
DDX23-215ENST00000552555 PSMD1Q99460 953 aa11.97□□□□□ -0.49
DDX23-215ENST00000552555 MYL10Q9BUA6 226 aa11.97□□□□□ -0.49
DDX23-215ENST00000552555 PDGFDQ9GZP0 370 aaPredicted RBP11.97□□□□□ -0.49
DDX23-215ENST00000552555 GRPEL1Q9HAV7 217 aa11.97□□□□□ -0.49
DDX23-215ENST00000552555 IL17RBQ9NRM6 502 aa11.97□□□□□ -0.49
DDX23-215ENST00000552555 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 SLX4Q8IY92 1834 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 TSPY2A6NKD2 308 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 PRPF3O43395 683 aaKnown RBP11.96□□□□□ -0.49
DDX23-215ENST00000552555 YEATS4O95619 227 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 POLR3DP05423 398 aaPredicted RBP11.96□□□□□ -0.49
DDX23-215ENST00000552555 RASA1P20936 1047 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 TFAP4Q01664 338 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 MYSM1Q5VVJ2 828 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 MAPKAPK5Q8IW41 473 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 NEDD1Q8NHV4 660 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 PHKBQ93100 1093 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 PGBD1Q96JS3 809 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 USP28Q96RU2 1077 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 POLR3EQ9NVU0 708 aa11.96□□□□□ -0.49
DDX23-215ENST00000552555 TFIP11Q9UBB9 837 aaKnown RBP11.96□□□□□ -0.49
DDX23-215ENST00000552555 TTF2Q9UNY4 1162 aaKnown RBP11.96□□□□□ -0.49
DDX23-215ENST00000552555 MORC2Q9Y6X9 1032 aaPredicted RBP11.96□□□□□ -0.49
DDX23-215ENST00000552555 USP17L3A6NCW0 530 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 USP17L4A6NCW7 530 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 ECE2O60344 883 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 CDK8P49336 464 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 TGFB2P61812 414 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 CCDC93Q567U6 631 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 OTUD7BQ6GQQ9 843 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 RBM43Q6ZSC3 357 aaKnown RBP11.95□□□□□ -0.5
DDX23-215ENST00000552555 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 STK11IPQ8N1F8 1099 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 TTLL6Q8N841 843 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 DYNLL2Q96FJ2 89 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 SLC26A6Q9BXS9 759 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 SERPINA10Q9UK55 444 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 BAZ2AQ9UIF9 1905 aaKnown RBP11.95□□□□□ -0.5
DDX23-215ENST00000552555 MYH2Q9UKX2 1941 aa11.95□□□□□ -0.5
DDX23-215ENST00000552555 ZNF646O15015 1829 aaPredicted RBP11.95□□□□□ -0.5
DDX23-215ENST00000552555 NAV1Q8NEY1 1877 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 A0A1W2PQ27 194 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 A0A1W2PQ64 194 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 A0A1W2PQD8 194 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 KIF28PB7ZC32 967 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 G3V3G9 751 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 MMP1P03956 469 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 CRKP46108 304 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 GUCY1B3Q02153 619 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 PKN1Q16512 942 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 FAM47AQ5JRC9 791 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 CDC42EP5Q6NZY7 148 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
DDX23-215ENST00000552555 FAM177A1Q8N128 213 aaPredicted RBP11.94□□□□□ -0.5
DDX23-215ENST00000552555 LINC00301Q8NCQ3 95 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 AIFM3Q96NN9 605 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
DDX23-215ENST00000552555 IDI2Q9BXS1 227 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 EHD4Q9H223 541 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 FOXP1Q9H334 677 aaPredicted RBP11.94□□□□□ -0.5
DDX23-215ENST00000552555 DBNDD1Q9H9R9 158 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 MKNK2Q9HBH9 465 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 GJB4Q9NTQ9 266 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 DDX19AQ9NUU7 478 aaKnown RBP11.94□□□□□ -0.5
DDX23-215ENST00000552555 KIF13BQ9NQT8 1826 aa11.94□□□□□ -0.5
DDX23-215ENST00000552555 IGKV6D-41A0A0C4DH26 115 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 SYCE3A1L190 88 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 NMT2O60551 498 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 PPFIA3O75145 1194 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 SMARCA1P28370 1054 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 KIF5BP33176 963 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 GUCY1A2P33402 732 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 GNAQP50148 359 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 TRIM29Q14134 588 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 GRM4Q14833 912 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 SOGA3Q5TF21 947 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
DDX23-215ENST00000552555 KCNG4Q8TDN1 519 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 NUP133Q8WUM0 1156 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 FUCA2Q9BTY2 467 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 MXD3Q9BW11 206 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 OSBPL5Q9H0X9 879 aaPredicted RBP11.93□□□□□ -0.5
DDX23-215ENST00000552555 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 SWAP70Q9UH65 585 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 SAP30BPQ9UHR5 308 aaKnown RBP11.93□□□□□ -0.5
DDX23-215ENST00000552555 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
DDX23-215ENST00000552555 CNTNAP5Q8WYK1 1306 aa11.92□□□□□ -0.5
DDX23-215ENST00000552555 COL2A1P02458 1487 aaPredicted RBP11.92□□□□□ -0.5
DDX23-215ENST00000552555 TSPY3P0CV98 308 aa11.92□□□□□ -0.5
DDX23-215ENST00000552555 TSPY8P0CW00 308 aa11.92□□□□□ -0.5
DDX23-215ENST00000552555 DPEP1P16444 411 aa11.92□□□□□ -0.5
DDX23-215ENST00000552555 LIG1P18858 919 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms