RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 MAPK4P31152 587 aa20.81■□□□□ 0.92
CACNB3-222ENST00000552465 MCAMP43121 646 aa20.81■□□□□ 0.92
CACNB3-222ENST00000552465 PDE3AQ14432 1141 aa20.81■□□□□ 0.92
CACNB3-222ENST00000552465 Q3C1V9 767 aa20.81■□□□□ 0.92
CACNB3-222ENST00000552465 FOXP4Q8IVH2 680 aaPredicted RBP20.81■□□□□ 0.92
CACNB3-222ENST00000552465 NOL10Q9BSC4 688 aaKnown RBP20.81■□□□□ 0.92
CACNB3-222ENST00000552465 DDX60LQ5H9U9 1706 aaKnown RBP20.81■□□□□ 0.92
CACNB3-222ENST00000552465 USP17L10C9JJH3 530 aa20.8■□□□□ 0.92
CACNB3-222ENST00000552465 BAG3O95817 575 aa20.8■□□□□ 0.92
CACNB3-222ENST00000552465 UQCRFS1P1P0C7P4 283 aa20.8■□□□□ 0.92
CACNB3-222ENST00000552465 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
CACNB3-222ENST00000552465 LHX8Q68G74 356 aa20.8■□□□□ 0.92
CACNB3-222ENST00000552465 METTL16Q86W50 562 aaKnown RBP20.8■□□□□ 0.92
CACNB3-222ENST00000552465 DNAJC18Q9H819 358 aa20.8■□□□□ 0.92
CACNB3-222ENST00000552465 AATFQ9NY61 560 aaKnown RBP eCLIP20.8■□□□□ 0.92
CACNB3-222ENST00000552465 PLXNB2O15031 1838 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 PLCG2P16885 1265 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 CCND3P30281 292 aaPredicted RBP20.79■□□□□ 0.92
CACNB3-222ENST00000552465 RGS2P41220 211 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 PPP4CP60510 307 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 ERVK-9P63128 1117 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 ERVK-24P63145 666 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 MORN1Q5T089 497 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
CACNB3-222ENST00000552465 TGFBRAP1Q8WUH2 860 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 PORCNQ9H237 461 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 GINM1Q9NU53 330 aa20.79■□□□□ 0.92
CACNB3-222ENST00000552465 CCL14Q16627 93 aa20.78■□□□□ 0.92
CACNB3-222ENST00000552465 LRRC26Q2I0M4 334 aa20.78■□□□□ 0.92
CACNB3-222ENST00000552465 SHROOM1Q2M3G4 852 aaPredicted RBP20.78■□□□□ 0.92
CACNB3-222ENST00000552465 POTEEQ6S8J3 1075 aa20.78■□□□□ 0.92
CACNB3-222ENST00000552465 GPR142Q7Z601 462 aa20.78■□□□□ 0.92
CACNB3-222ENST00000552465 MAPKAPK5Q8IW41 473 aa20.78■□□□□ 0.92
CACNB3-222ENST00000552465 CCAR1Q8IX12 1150 aaKnown RBP20.78■□□□□ 0.92
CACNB3-222ENST00000552465 GTF3C2Q8WUA4 911 aaPredicted RBP20.78■□□□□ 0.92
CACNB3-222ENST00000552465 ARHGAP45Q92619 1136 aa20.78■□□□□ 0.92
CACNB3-222ENST00000552465 LAMA3Q16787 3333 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 GDF11O95390 407 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 G3BP1Q13283 466 aaKnown RBP eCLIP20.77■□□□□ 0.92
CACNB3-222ENST00000552465 PLEKHH3Q7Z736 793 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 CRACR2BQ8N4Y2 399 aaPredicted RBP20.77■□□□□ 0.92
CACNB3-222ENST00000552465 PAGR1Q9BTK6 254 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 EMILIN3Q9NT22 766 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 PALD1Q9ULE6 856 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 ZBTB21Q9ULJ3 1066 aa20.77■□□□□ 0.92
CACNB3-222ENST00000552465 FLT1P17948 1338 aa20.77■□□□□ 0.91
CACNB3-222ENST00000552465 ATAD5Q96QE3 1844 aa20.76■□□□□ 0.91
CACNB3-222ENST00000552465 MDM2Q00987 491 aaPredicted RBP20.76■□□□□ 0.91
CACNB3-222ENST00000552465 ADGRA1Q86SQ6 560 aa20.76■□□□□ 0.91
CACNB3-222ENST00000552465 APBA2Q99767 749 aa20.76■□□□□ 0.91
CACNB3-222ENST00000552465 SNRKQ9NRH2 765 aa20.76■□□□□ 0.91
CACNB3-222ENST00000552465 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L2Q6R6M4 530 aa20.75■□□□□ 0.91
CACNB3-222ENST00000552465 COL6A3P12111 3177 aa20.75■□□□□ 0.91
CACNB3-222ENST00000552465 PNMA6EA0A0J9YXQ4 647 aa20.74■□□□□ 0.91
CACNB3-222ENST00000552465 MAP2K5Q13163 448 aa20.74■□□□□ 0.91
CACNB3-222ENST00000552465 GNAI2P04899 355 aa20.73■□□□□ 0.91
CACNB3-222ENST00000552465 EDC3Q96F86 508 aaKnown RBP20.73■□□□□ 0.91
CACNB3-222ENST00000552465 SAP30BPQ9UHR5 308 aaKnown RBP20.73■□□□□ 0.91
CACNB3-222ENST00000552465 RABGAP1Q9Y3P9 1069 aa20.73■□□□□ 0.91
CACNB3-222ENST00000552465 SIPA1L1O43166 1804 aa20.72■□□□□ 0.91
CACNB3-222ENST00000552465 POTEB2H3BUK9 544 aa20.72■□□□□ 0.91
CACNB3-222ENST00000552465 CNMDO75829 334 aa20.72■□□□□ 0.91
CACNB3-222ENST00000552465 CYP2E1P05181 493 aaPredicted RBP20.72■□□□□ 0.91
CACNB3-222ENST00000552465 HLA-DOAP06340 250 aa20.72■□□□□ 0.91
CACNB3-222ENST00000552465 TTC39AQ5SRH9 613 aa20.72■□□□□ 0.91
CACNB3-222ENST00000552465 FAM109BQ6ICB4 259 aaPredicted RBP20.72■□□□□ 0.91
CACNB3-222ENST00000552465 CWC22Q9HCG8 908 aaKnown RBP20.72■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L15C9J2P7 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L13C9JLJ4 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L11C9JVI0 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L18D6R9N7 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L22D6RA61 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L17D6RBQ6 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L19D6RCP7 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L20D6RJB6 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 GLRX3O76003 335 aaKnown RBP20.71■□□□□ 0.91
CACNB3-222ENST00000552465 GH2P01242 217 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 CCNA1P78396 465 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 USP17L24Q0WX57 530 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 CCDC158Q5M9N0 1113 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 MFSD14CQ5VZR4 134 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 ATF7IPQ6VMQ6 1270 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 C12orf42Q96LP6 360 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 DBNDD2Q9BQY9 259 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 SENP6Q9GZR1 1112 aaPredicted RBP20.71■□□□□ 0.91
CACNB3-222ENST00000552465 GPR108Q9NPR9 543 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 FLRT1Q9NZU1 646 aa20.71■□□□□ 0.91
CACNB3-222ENST00000552465 IGSF3O75054 1194 aa20.7■□□□□ 0.9
CACNB3-222ENST00000552465 TNNI3KQ59H18 835 aa20.7■□□□□ 0.9
CACNB3-222ENST00000552465 LBHD1Q9BQE6 289 aaPredicted RBP20.7■□□□□ 0.9
CACNB3-222ENST00000552465 COL25A1Q9BXS0 654 aaPredicted RBP20.7■□□□□ 0.9
CACNB3-222ENST00000552465 NDUFB9Q9Y6M9 179 aa20.7■□□□□ 0.9
CACNB3-222ENST00000552465 FPGT-TNNI3KV9GXZ4 949 aa20.7■□□□□ 0.9
CACNB3-222ENST00000552465 SLC15A5A6NIM6 579 aa20.69■□□□□ 0.9
CACNB3-222ENST00000552465 PTPREP23469 700 aa20.69■□□□□ 0.9
CACNB3-222ENST00000552465 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
CACNB3-222ENST00000552465 TATDN1Q6P1N9 297 aa20.69■□□□□ 0.9
CACNB3-222ENST00000552465 CATSPERGQ6ZRH7 1159 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms