RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	C17orf99	Q6UX52	265 aa		10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	SH3BP5L	Q7L8J4	393 aa		10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	OTOP1	Q7RTM1	612 aa		10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	FAM43A	Q8N2R8	423 aa		10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	ZNF384	Q8TF68	577 aa		10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	SH2D4A	Q9H788	454 aa		10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	PIH1D3	Q9NQM4	214 aa	Known RBP	10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	HPS5	Q9UPZ3	1129 aa		10.89	□□□□□ -0.67
ATXN2-223	ENST00000551551	APBB1	O00213	710 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	PRKAR2A	P13861	404 aa	Known RBP	10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	PDE6A	P16499	860 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	HOXA7	P31268	230 aa	Predicted RBP	10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	BACE1	P56817	501 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	SPP2	Q13103	211 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	HDAC1	Q13547	482 aa	Predicted RBP	10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	CERKL	Q49MI3	558 aa	Predicted RBP	10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	TATDN1	Q6P1N9	297 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	CDAN1	Q8IWY9	1227 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	NKX2-3	Q8TAU0	364 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	DNAJC2	Q99543	621 aa	Known RBP	10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	BOLA2	Q9H3K6	86 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	PALD1	Q9ULE6	856 aa		10.88	□□□□□ -0.67
ATXN2-223	ENST00000551551	CASP8AP2	Q9UKL3	1982 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	TRIM75P	A6NK02	468 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	FMNL1	O95466	1100 aa	Predicted RBP	10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	SLC3A2	P08195	630 aa	Known RBP	10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	ADD2	P35612	726 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	MKRN4P	Q13434	485 aa	Predicted RBP	10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	SLC9C1	Q4G0N8	1177 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L2	Q6R6M4	530 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	MAPKAPK5	Q8IW41	473 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	CCAR1	Q8IX12	1150 aa	Known RBP	10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	TRMT44	Q8IYL2	757 aa	Known RBP	10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	COA7	Q96BR5	231 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	TRIM47	Q96LD4	638 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	NACAP1	Q9BZK3	213 aa		10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	TLR7	Q9NYK1	1049 aa	Known RBP	10.87	□□□□□ -0.67
ATXN2-223	ENST00000551551	ZNF532	Q9HCE3	1301 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	LAMB1	P07942	1786 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	PSMC4	P43686	418 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	NT5C2	P49902	561 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	UBXN2A	P68543	259 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	CCNA1	P78396	465 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	IRX3	P78415	501 aa	Predicted RBP	10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	FAM110C	Q1W6H9	321 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	ABCB5	Q2M3G0	1257 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	GADL1	Q6ZQY3	521 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	KBTBD3	Q8NAB2	608 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	MIGA1	Q8NAN2	632 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	ARMC5	Q96C12	935 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	RIOK1	Q9BRS2	568 aa	Known RBP	10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	MCM9	Q9NXL9	1143 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	HOXC10	Q9NYD6	342 aa		10.86	□□□□□ -0.67
ATXN2-223	ENST00000551551	C20orf194	Q5TEA3	1177 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	GPAT2	Q6NUI2	795 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	TMEM179	Q6ZVK1	233 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	CD99L2	Q8TCZ2	262 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	RAET1E	Q8TD07	263 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	PXYLP1	Q8TE99	480 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	LPAR1	Q92633	364 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	KIAA1683	Q9H0B3	1180 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	ANTXR1	Q9H6X2	564 aa		10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.85	□□□□□ -0.67
ATXN2-223	ENST00000551551	TCRBV5S4A2T	A0A5A2	114 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L15	C9J2P7	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L13	C9JLJ4	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L11	C9JVI0	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L18	D6R9N7	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L22	D6RA61	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L17	D6RBQ6	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L19	D6RCP7	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L20	D6RJB6	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	RNF113A	O15541	343 aa	Known RBP	10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	BCR	P11274	1271 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	MFAP1	P55081	439 aa	Known RBP	10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	USP17L24	Q0WX57	530 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	IRF5	Q13568	498 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	ADGRA1	Q86SQ6	560 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	SLAIN1	Q8ND83	568 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	APPBP2	Q92624	585 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	C12orf42	Q96LP6	360 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	R3HDML	Q9H3Y0	253 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	ARHGEF10L	Q9HCE6	1279 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	SRRD	Q9UH36	339 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	SYNPO2	Q9UMS6	1093 aa		10.84	□□□□□ -0.67
ATXN2-223	ENST00000551551	PATL2	C9JE40	543 aa	Known RBP	10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	MX1	P20591	662 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	MAPK4	P31152	587 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	DYNLL1	P63167	89 aa	Known RBP	10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	MOGS	Q13724	837 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	SBK1	Q52WX2	424 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	MB21D1	Q8N884	522 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	GPRC5A	Q8NFJ5	357 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	EVI5L	Q96CN4	794 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	FEZ1	Q99689	392 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	KANSL2	Q9H9L4	492 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	ZBTB21	Q9ULJ3	1066 aa		10.83	□□□□□ -0.68
ATXN2-223	ENST00000551551	TNPO2	O14787	897 aa	Known RBP	10.82	□□□□□ -0.68

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