RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 METTL16Q86W50 562 aaKnown RBP21.93■■□□□ 1.1
PRPF40B-215ENST00000551418 DIS3LQ8TF46 1054 aaKnown RBP21.93■■□□□ 1.1
PRPF40B-215ENST00000551418 ZNF512BQ96KM6 892 aaPredicted RBP21.93■■□□□ 1.1
PRPF40B-215ENST00000551418 CRISPLD2Q9H0B8 497 aa21.93■■□□□ 1.1
PRPF40B-215ENST00000551418 PRO3102Q9H379 93 aa21.93■■□□□ 1.1
PRPF40B-215ENST00000551418 RANBP2P49792 3224 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 PLCG2P16885 1265 aa21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 CYP7A1P22680 504 aa21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 FOXP4Q8IVH2 680 aaPredicted RBP21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 PAWRQ96IZ0 340 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 TBC1D2Q9BYX2 928 aa21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 AS3MTQ9HBK9 375 aa21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 SZT2Q5T011 3432 aa21.92■■□□□ 1.1
PRPF40B-215ENST00000551418 PABPC4Q13310 644 aaKnown RBP eCLIP21.91■■□□□ 1.1
PRPF40B-215ENST00000551418 ITPRIPQ8IWB1 547 aa21.91■■□□□ 1.1
PRPF40B-215ENST00000551418 MIGA1Q8NAN2 632 aa21.91■■□□□ 1.1
PRPF40B-215ENST00000551418 ANTXR1Q9H6X2 564 aa21.91■■□□□ 1.1
PRPF40B-215ENST00000551418 MORF4L1Q9UBU8 362 aa21.91■■□□□ 1.1
PRPF40B-215ENST00000551418 MYH1P12882 1939 aa21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 ASNSP08243 561 aa21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 HOXA7P31268 230 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 HNRNPUQ00839 825 aaKnown RBP eCLIP21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 Q3C1V9 767 aa21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 CRACR2BQ8N4Y2 399 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 RBPJLQ9UBG7 517 aa21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 ZBTB21Q9ULJ3 1066 aa21.9■■□□□ 1.1
PRPF40B-215ENST00000551418 IDH1O75874 414 aaKnown RBP21.89■■□□□ 1.09
PRPF40B-215ENST00000551418 IRX3P78415 501 aaPredicted RBP21.89■■□□□ 1.09
PRPF40B-215ENST00000551418 TRIB2Q92519 343 aa21.89■■□□□ 1.09
PRPF40B-215ENST00000551418 EMILIN3Q9NT22 766 aa21.89■■□□□ 1.09
PRPF40B-215ENST00000551418 TMOD4Q9NZQ9 345 aa21.89■■□□□ 1.09
PRPF40B-215ENST00000551418 NR2E3Q9Y5X4 410 aa21.89■■□□□ 1.09
PRPF40B-215ENST00000551418 USP17L10C9JJH3 530 aa21.88■■□□□ 1.09
PRPF40B-215ENST00000551418 HMGCRP04035 888 aa21.88■■□□□ 1.09
PRPF40B-215ENST00000551418 CYP2B6P20813 491 aa21.88■■□□□ 1.09
PRPF40B-215ENST00000551418 HERVK_113P62684 666 aa21.88■■□□□ 1.09
PRPF40B-215ENST00000551418 FTSJ3Q8IY81 847 aaKnown RBP21.88■■□□□ 1.09
PRPF40B-215ENST00000551418 EXOC6BQ9Y2D4 811 aa21.88■■□□□ 1.09
PRPF40B-215ENST00000551418 EVI5O60447 810 aa21.87■■□□□ 1.09
PRPF40B-215ENST00000551418 MNX1P50219 401 aaPredicted RBP21.87■■□□□ 1.09
PRPF40B-215ENST00000551418 CEP85Q6P2H3 762 aa21.87■■□□□ 1.09
PRPF40B-215ENST00000551418 MIER1Q8N108 512 aa21.87■■□□□ 1.09
PRPF40B-215ENST00000551418 MAGEB6Q8N7X4 407 aa21.87■■□□□ 1.09
PRPF40B-215ENST00000551418 TRIM34Q9BYJ4 488 aa21.87■■□□□ 1.09
PRPF40B-215ENST00000551418 C19orf81C9J6K1 198 aa21.86■■□□□ 1.09
PRPF40B-215ENST00000551418 GH2P01242 217 aa21.86■■□□□ 1.09
PRPF40B-215ENST00000551418 PANK1Q8TE04 598 aa21.86■■□□□ 1.09
PRPF40B-215ENST00000551418 PORCNQ9H237 461 aa21.86■■□□□ 1.09
PRPF40B-215ENST00000551418 STAP2Q9UGK3 403 aa21.86■■□□□ 1.09
PRPF40B-215ENST00000551418 EVX2Q03828 476 aa21.85■■□□□ 1.09
PRPF40B-215ENST00000551418 ZYXQ15942 572 aaKnown RBP21.85■■□□□ 1.09
PRPF40B-215ENST00000551418 GPRC5AQ8NFJ5 357 aa21.85■■□□□ 1.09
PRPF40B-215ENST00000551418 RPTORQ8N122 1335 aa21.84■■□□□ 1.09
PRPF40B-215ENST00000551418 HLA-DOAP06340 250 aa21.84■■□□□ 1.09
PRPF40B-215ENST00000551418 TATDN1Q6P1N9 297 aa21.84■■□□□ 1.09
PRPF40B-215ENST00000551418 AACSQ86V21 672 aa21.84■■□□□ 1.09
PRPF40B-215ENST00000551418 PAGR1Q9BTK6 254 aa21.84■■□□□ 1.09
PRPF40B-215ENST00000551418 HMX1Q9NP08 348 aaPredicted RBP21.84■■□□□ 1.09
PRPF40B-215ENST00000551418 SOX1O00570 391 aaPredicted RBP21.83■■□□□ 1.09
PRPF40B-215ENST00000551418 USP5P45974 858 aa21.83■■□□□ 1.09
PRPF40B-215ENST00000551418 CCL14Q16627 93 aa21.83■■□□□ 1.09
PRPF40B-215ENST00000551418 NECAB2Q7Z6G3 386 aa21.83■■□□□ 1.09
PRPF40B-215ENST00000551418 ACER1Q8TDN7 264 aa21.83■■□□□ 1.09
PRPF40B-215ENST00000551418 USP6NLQ92738 828 aa21.83■■□□□ 1.09
PRPF40B-215ENST00000551418 IL1RAPL2Q9NP60 686 aa21.83■■□□□ 1.09
PRPF40B-215ENST00000551418 DDX60LQ5H9U9 1706 aaKnown RBP21.83■■□□□ 1.08
PRPF40B-215ENST00000551418 CNMDO75829 334 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 PLCD1P51178 756 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 ERVK-9P63128 1117 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 ERVK-24P63145 666 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 MAP3K21Q5TCX8 1036 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 USP17L2Q6R6M4 530 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 NUDT12Q9BQG2 462 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 GINM1Q9NU53 330 aa21.82■■□□□ 1.08
PRPF40B-215ENST00000551418 PRKAR2AP13861 404 aaKnown RBP21.81■■□□□ 1.08
PRPF40B-215ENST00000551418 GPR142Q7Z601 462 aa21.81■■□□□ 1.08
PRPF40B-215ENST00000551418 C7orf61Q8IZ16 206 aa21.81■■□□□ 1.08
PRPF40B-215ENST00000551418 RIOK1Q9BRS2 568 aaKnown RBP21.81■■□□□ 1.08
PRPF40B-215ENST00000551418 ZMYND8Q9ULU4 1186 aaPredicted RBP21.81■■□□□ 1.08
PRPF40B-215ENST00000551418 GUCY1A2P33402 732 aa21.8■■□□□ 1.08
PRPF40B-215ENST00000551418 CACNB2Q08289 660 aaPredicted RBP21.8■■□□□ 1.08
PRPF40B-215ENST00000551418 RAB3GAP1Q15042 981 aa21.8■■□□□ 1.08
PRPF40B-215ENST00000551418 MORN1Q5T089 497 aa21.8■■□□□ 1.08
PRPF40B-215ENST00000551418 SERPINB13Q9UIV8 391 aa21.8■■□□□ 1.08
PRPF40B-215ENST00000551418 OGDHLQ9ULD0 1010 aa21.8■■□□□ 1.08
PRPF40B-215ENST00000551418 IGSF3O75054 1194 aa21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 XRCC5P13010 732 aaKnown RBP21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 CAPN2P17655 700 aa21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 CCND3P30281 292 aaPredicted RBP21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 SHMT1P34896 483 aa21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 MAP3K12Q12852 859 aa21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 ANKLE1Q8NAG6 615 aa21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 LRCH3Q96II8 777 aa21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 NBPF3Q9H094 633 aa21.79■■□□□ 1.08
PRPF40B-215ENST00000551418 APBB1O00213 710 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 SYN1P17600 705 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 MAPK4P31152 587 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 CERKLQ49MI3 558 aaPredicted RBP21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 PLEKHH3Q7Z736 793 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms