RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ABHD8Q96I13 439 aa16.03■□□□□ 0.16
ERBB3-215ENST00000550828 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.03■□□□□ 0.16
ERBB3-215ENST00000550828 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.03■□□□□ 0.16
ERBB3-215ENST00000550828 RASSF10A6NK89 507 aa16.02■□□□□ 0.16
ERBB3-215ENST00000550828 E7EWF7 191 aa16.02■□□□□ 0.16
ERBB3-215ENST00000550828 ORC4O43929 436 aa16.02■□□□□ 0.16
ERBB3-215ENST00000550828 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.16
ERBB3-215ENST00000550828 AKR1B1P15121 316 aa16.02■□□□□ 0.16
ERBB3-215ENST00000550828 ZNF341Q9BYN7 854 aa16.02■□□□□ 0.16
ERBB3-215ENST00000550828 SWAP70Q9UH65 585 aa16.02■□□□□ 0.16
ERBB3-215ENST00000550828 GDF11O95390 407 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
ERBB3-215ENST00000550828 GUCY1A2P33402 732 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 MAP3K11Q16584 847 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 DEFB115Q30KQ5 88 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 DCAF15Q66K64 600 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.01■□□□□ 0.15
ERBB3-215ENST00000550828 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 WRNIP1Q96S55 665 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
ERBB3-215ENST00000550828 ANGEL1Q9UNK9 670 aaKnown RBP16.01■□□□□ 0.15
ERBB3-215ENST00000550828 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 B4E1Z4 1266 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 UBE2Q2LH0YL09 131 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 LDLRAD1Q5T700 205 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 CYB5R4Q7L1T6 521 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 CCDC84Q86UT8 332 aaPredicted RBP16■□□□□ 0.15
ERBB3-215ENST00000550828 CLEC10AQ8IUN9 316 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 MB21D2Q8IYB1 491 aaPredicted RBP16■□□□□ 0.15
ERBB3-215ENST00000550828 ZKSCAN4Q969J2 545 aaPredicted RBP16■□□□□ 0.15
ERBB3-215ENST00000550828 HOOK2Q96ED9 719 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 CLMNQ96JQ2 1002 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 KIF2CQ99661 725 aa16■□□□□ 0.15
ERBB3-215ENST00000550828 GBA2Q9HCG7 927 aaPredicted RBP16■□□□□ 0.15
ERBB3-215ENST00000550828 CPA1P15085 419 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 NF2P35240 595 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 CAP2P40123 477 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 ANTXR2P58335 489 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 VGLL4Q14135 290 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 CERKLQ49MI3 558 aaPredicted RBP15.99■□□□□ 0.15
ERBB3-215ENST00000550828 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
ERBB3-215ENST00000550828 MFSD6Q6ZSS7 791 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 TBC1D32Q96NH3 1257 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 TAOK2Q9UL54 1235 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 ZBTB21Q9ULJ3 1066 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 SNCAIPQ9Y6H5 919 aa15.99■□□□□ 0.15
ERBB3-215ENST00000550828 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
ERBB3-215ENST00000550828 IGKV6D-41A0A0C4DH26 115 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 PPP1R12BO60237 982 aaPredicted RBP15.98■□□□□ 0.15
ERBB3-215ENST00000550828 NMT2O60551 498 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 GH2P01242 217 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
ERBB3-215ENST00000550828 RBM25P49756 843 aaKnown RBP15.98■□□□□ 0.15
ERBB3-215ENST00000550828 PDE4BQ07343 736 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 NOL9Q5SY16 702 aaKnown RBP15.98■□□□□ 0.15
ERBB3-215ENST00000550828 RNF20Q5VTR2 975 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 C22orf23Q9BZE7 217 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
ERBB3-215ENST00000550828 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 LOC285556D6RIA3 1793 aa15.98■□□□□ 0.15
ERBB3-215ENST00000550828 KDM4AO75164 1064 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 PCP11498 1178 aaKnown RBP15.97■□□□□ 0.15
ERBB3-215ENST00000550828 MAP3K9P80192 1104 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 TFAP4Q01664 338 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 MLLT1Q03111 559 aaPredicted RBP15.97■□□□□ 0.15
ERBB3-215ENST00000550828 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
ERBB3-215ENST00000550828 SEPT2Q15019 361 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 ABCB5Q2M3G0 1257 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 ARMC9Q7Z3E5 817 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 SIAH1Q8IUQ4 282 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 SCYL3Q8IZE3 742 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 JAKMIP1Q96N16 626 aaKnown RBP15.97■□□□□ 0.15
ERBB3-215ENST00000550828 BEGAINQ9BUH8 593 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 GPHNQ9NQX3 736 aaPredicted RBP15.97■□□□□ 0.15
ERBB3-215ENST00000550828 IL17RBQ9NRM6 502 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 ZSWIM5Q9P217 1185 aa15.97■□□□□ 0.15
ERBB3-215ENST00000550828 ABT1Q9ULW3 272 aaKnown RBP15.97■□□□□ 0.15
ERBB3-215ENST00000550828 PARP14Q460N5 1801 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 RANBP6O60518 1105 aaKnown RBP15.96■□□□□ 0.15
ERBB3-215ENST00000550828 CTNND1O60716 968 aaKnown RBP15.96■□□□□ 0.15
ERBB3-215ENST00000550828 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
ERBB3-215ENST00000550828 MCCP23508 829 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 GJA5P36382 358 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 ECE1P42892 770 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 IREB2P48200 963 aaKnown RBP15.96■□□□□ 0.15
ERBB3-215ENST00000550828 FKBP1BP68106 108 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 CHST3Q7LGC8 479 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 NEDD1Q8NHV4 660 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 CCDC17Q96LX7 622 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 TCEANC2Q96MN5 208 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 TOMM22Q9NS69 142 aa15.96■□□□□ 0.15
ERBB3-215ENST00000550828 ZKSCAN1P17029 563 aaPredicted RBP15.95■□□□□ 0.14
ERBB3-215ENST00000550828 ANAPC15P60006 121 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 RCSD1Q6JBY9 416 aa15.95■□□□□ 0.14
ERBB3-215ENST00000550828 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
ERBB3-215ENST00000550828 C2orf69Q8N8R5 385 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms