RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 ASNSP08243 561 aa29.43■■■□□ 2.3
PXN-217ENST00000550795 PRPF38BQ5VTL8 546 aaKnown RBP29.43■■■□□ 2.3
PXN-217ENST00000550795 TTC6Q86TZ1 520 aa29.43■■■□□ 2.3
PXN-217ENST00000550795 OTUD7AQ8TE49 926 aaPredicted RBP29.43■■■□□ 2.3
PXN-217ENST00000550795 EHD4Q9H223 541 aa29.43■■■□□ 2.3
PXN-217ENST00000550795 SERPINB13Q9UIV8 391 aa29.43■■■□□ 2.3
PXN-217ENST00000550795 PRKAB2O43741 272 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 MBD4O95243 580 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 HMGCS2P54868 508 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 GPATCH3Q96I76 525 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 TRIM47Q96LD4 638 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 TBC1D2Q9BYX2 928 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 ZBTB21Q9ULJ3 1066 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 AGTPBP1Q9UPW5 1226 aa29.42■■■□□ 2.3
PXN-217ENST00000550795 POLR3DP05423 398 aaPredicted RBP29.41■■■□□ 2.3
PXN-217ENST00000550795 BCRP11274 1271 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 KIF22Q14807 665 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 ARHGEF6Q15052 776 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 UBE3CQ15386 1083 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 SLC9C1Q4G0N8 1177 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 TATDN1Q6P1N9 297 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 WDR18Q9BV38 432 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 AS3MTQ9HBK9 375 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 DCP1AQ9NPI6 582 aaPredicted RBP29.41■■■□□ 2.3
PXN-217ENST00000550795 MCM9Q9NXL9 1143 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 SLC45A1Q9Y2W3 748 aa29.41■■■□□ 2.3
PXN-217ENST00000550795 EN2P19622 333 aaPredicted RBP29.4■■■□□ 2.3
PXN-217ENST00000550795 PROCA1Q8NCQ7 364 aaPredicted RBP29.4■■■□□ 2.3
PXN-217ENST00000550795 SH3TC2Q8TF17 1288 aa29.4■■■□□ 2.3
PXN-217ENST00000550795 GH2P01242 217 aa29.39■■■□□ 2.3
PXN-217ENST00000550795 CYP2D6P10635 497 aa29.39■■■□□ 2.3
PXN-217ENST00000550795 SHMT1P34896 483 aa29.38■■■□□ 2.29
PXN-217ENST00000550795 MTMR2Q13614 643 aa29.38■■■□□ 2.29
PXN-217ENST00000550795 SH3D19Q5HYK7 790 aa29.38■■■□□ 2.29
PXN-217ENST00000550795 PUS7LQ9H0K6 701 aaKnown RBP29.38■■■□□ 2.29
PXN-217ENST00000550795 GINM1Q9NU53 330 aa29.38■■■□□ 2.29
PXN-217ENST00000550795 DOCK3Q8IZD9 2030 aa29.37■■■□□ 2.29
PXN-217ENST00000550795 OSBPP22059 807 aa29.37■■■□□ 2.29
PXN-217ENST00000550795 PSMC4P43686 418 aa29.37■■■□□ 2.29
PXN-217ENST00000550795 BACE1P56817 501 aa29.37■■■□□ 2.29
PXN-217ENST00000550795 ZSCAN25Q6NSZ9 544 aa29.37■■■□□ 2.29
PXN-217ENST00000550795 KBTBD3Q8NAB2 608 aa29.37■■■□□ 2.29
PXN-217ENST00000550795 BAZ2AQ9UIF9 1905 aaKnown RBP29.37■■■□□ 2.29
PXN-217ENST00000550795 GNRH1P01148 92 aa29.36■■■□□ 2.29
PXN-217ENST00000550795 GABPAQ06546 454 aa29.36■■■□□ 2.29
PXN-217ENST00000550795 CERKLQ49MI3 558 aaPredicted RBP29.36■■■□□ 2.29
PXN-217ENST00000550795 SRRDQ9UH36 339 aa29.36■■■□□ 2.29
PXN-217ENST00000550795 HDAC1Q13547 482 aaPredicted RBP29.35■■■□□ 2.29
PXN-217ENST00000550795 ANKRD45Q5TZF3 282 aa29.35■■■□□ 2.29
PXN-217ENST00000550795 PI4K2BQ8TCG2 481 aa29.35■■■□□ 2.29
PXN-217ENST00000550795 SMCR8Q8TEV9 937 aaPredicted RBP29.35■■■□□ 2.29
PXN-217ENST00000550795 TTC41PQ6P2S7 1318 aa29.35■■■□□ 2.29
PXN-217ENST00000550795 SMIM22K7EJ46 135 aa29.34■■■□□ 2.29
PXN-217ENST00000550795 PRMT2P55345 433 aa29.34■■■□□ 2.29
PXN-217ENST00000550795 ATP8A2Q9NTI2 1148 aa29.34■■■□□ 2.29
PXN-217ENST00000550795 CYP2D7A0A087X1C5 515 aa29.33■■■□□ 2.29
PXN-217ENST00000550795 USP17L10C9JJH3 530 aa29.33■■■□□ 2.29
PXN-217ENST00000550795 FMNL1O95466 1100 aaPredicted RBP29.33■■■□□ 2.29
PXN-217ENST00000550795 MYCP01106 439 aaPredicted RBP29.33■■■□□ 2.29
PXN-217ENST00000550795 ABCB5Q2M3G0 1257 aa29.33■■■□□ 2.29
PXN-217ENST00000550795 EXOC6Q8TAG9 804 aa29.33■■■□□ 2.29
PXN-217ENST00000550795 SLC4A4Q9Y6R1 1079 aa29.33■■■□□ 2.29
PXN-217ENST00000550795 MYPNQ86TC9 1320 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 C19orf81C9J6K1 198 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 RAB3GAP1Q15042 981 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 NBPF11Q86T75 865 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 ANKRD13CQ8N6S4 541 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 SLC44A5Q8NCS7 719 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 DYNLL2Q96FJ2 89 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 ASCC2Q9H1I8 757 aaPredicted RBP29.32■■■□□ 2.28
PXN-217ENST00000550795 TMOD4Q9NZQ9 345 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 PNMA3Q9UL41 463 aa29.32■■■□□ 2.28
PXN-217ENST00000550795 SALL3Q9BXA9 1300 aa29.31■■■□□ 2.28
PXN-217ENST00000550795 OSBP2Q969R2 916 aa29.31■■■□□ 2.28
PXN-217ENST00000550795 GCC1Q96CN9 775 aa29.31■■■□□ 2.28
PXN-217ENST00000550795 EMILIN3Q9NT22 766 aa29.31■■■□□ 2.28
PXN-217ENST00000550795 USP17L12C9JPN9 530 aa29.3■■■□□ 2.28
PXN-217ENST00000550795 USP17L21D6R901 530 aa29.3■■■□□ 2.28
PXN-217ENST00000550795 ERC2O15083 957 aa29.3■■■□□ 2.28
PXN-217ENST00000550795 RNF113AO15541 343 aaKnown RBP29.3■■■□□ 2.28
PXN-217ENST00000550795 MX1P20591 662 aa29.3■■■□□ 2.28
PXN-217ENST00000550795 GUCY1A2P33402 732 aa29.3■■■□□ 2.28
PXN-217ENST00000550795 PRKCZQ05513 592 aa29.3■■■□□ 2.28
PXN-217ENST00000550795 PABPC4Q13310 644 aaKnown RBP eCLIP29.3■■■□□ 2.28
PXN-217ENST00000550795 STRBPQ96SI9 672 aaKnown RBP29.3■■■□□ 2.28
PXN-217ENST00000550795 TMEM106CQ9BVX2 250 aa29.3■■■□□ 2.28
PXN-217ENST00000550795 SUPT16HQ9Y5B9 1047 aaKnown RBP29.3■■■□□ 2.28
PXN-217ENST00000550795 PLXNB2O15031 1838 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 GLRX3O76003 335 aaKnown RBP29.29■■■□□ 2.28
PXN-217ENST00000550795 AAMPQ13685 434 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 MTFR1Q15390 333 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 C12orf60Q5U649 245 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 ACER1Q8TDN7 264 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 SHISA4Q96DD7 197 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 CABP5Q9NP86 173 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 GABRQQ9UN88 632 aa29.29■■■□□ 2.28
PXN-217ENST00000550795 FCGRTP55899 365 aa29.28■■■□□ 2.28
PXN-217ENST00000550795 SEPT2Q15019 361 aa29.28■■■□□ 2.28
PXN-217ENST00000550795 ZYXQ15942 572 aaKnown RBP29.28■■■□□ 2.28
PXN-217ENST00000550795 APPBP2Q92624 585 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms