RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 DBNLQ9UJU6 430 aaKnown RBP13.28□□□□□ -0.28
PFDN5-210ENST00000550513 SZT2Q5T011 3432 aa13.28□□□□□ -0.28
PFDN5-210ENST00000550513 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.28
PFDN5-210ENST00000550513 GDF11O95390 407 aa13.27□□□□□ -0.29
PFDN5-210ENST00000550513 HMGCRP04035 888 aa13.27□□□□□ -0.29
PFDN5-210ENST00000550513 HLA-DOAP06340 250 aa13.27□□□□□ -0.29
PFDN5-210ENST00000550513 IRX3P78415 501 aaPredicted RBP13.27□□□□□ -0.29
PFDN5-210ENST00000550513 WDR18Q9BV38 432 aa13.27□□□□□ -0.29
PFDN5-210ENST00000550513 PIH1D3Q9NQM4 214 aaKnown RBP13.27□□□□□ -0.29
PFDN5-210ENST00000550513 PALD1Q9ULE6 856 aa13.27□□□□□ -0.29
PFDN5-210ENST00000550513 ZBTB21Q9ULJ3 1066 aa13.27□□□□□ -0.29
PFDN5-210ENST00000550513 ZNF236Q9UL36 1845 aa13.27□□□□□ -0.29
PFDN5-210ENST00000550513 RANBP2P49792 3224 aaKnown RBP13.26□□□□□ -0.29
PFDN5-210ENST00000550513 IDH1O75874 414 aaKnown RBP13.26□□□□□ -0.29
PFDN5-210ENST00000550513 TFRCP02786 760 aaKnown RBP13.26□□□□□ -0.29
PFDN5-210ENST00000550513 CAPN2P17655 700 aa13.26□□□□□ -0.29
PFDN5-210ENST00000550513 BACE1P56817 501 aa13.26□□□□□ -0.29
PFDN5-210ENST00000550513 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
PFDN5-210ENST00000550513 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.26□□□□□ -0.29
PFDN5-210ENST00000550513 GINM1Q9NU53 330 aa13.26□□□□□ -0.29
PFDN5-210ENST00000550513 MORF4L1Q9UBU8 362 aa13.26□□□□□ -0.29
PFDN5-210ENST00000550513 SAP30BPQ9UHR5 308 aaKnown RBP13.26□□□□□ -0.29
PFDN5-210ENST00000550513 NOP58Q9Y2X3 529 aaKnown RBP13.26□□□□□ -0.29
PFDN5-210ENST00000550513 NR2E3Q9Y5X4 410 aa13.26□□□□□ -0.29
PFDN5-210ENST00000550513 RLFQ13129 1914 aa13.25□□□□□ -0.29
PFDN5-210ENST00000550513 RLBP1P12271 317 aa13.25□□□□□ -0.29
PFDN5-210ENST00000550513 CYP7A1P22680 504 aa13.25□□□□□ -0.29
PFDN5-210ENST00000550513 DYNLL1P63167 89 aaKnown RBP13.25□□□□□ -0.29
PFDN5-210ENST00000550513 SHROOM1Q2M3G4 852 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-210ENST00000550513 CERS3Q8IU89 383 aa13.25□□□□□ -0.29
PFDN5-210ENST00000550513 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-210ENST00000550513 CCDC8Q9H0W5 538 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-210ENST00000550513 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
PFDN5-210ENST00000550513 PLXNA1Q9UIW2 1896 aa13.25□□□□□ -0.29
PFDN5-210ENST00000550513 C19orf81C9J6K1 198 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 USP17L10C9JJH3 530 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 ZBTB7BO15156 539 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-210ENST00000550513 EVI5O60447 810 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 HOXA7P31268 230 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-210ENST00000550513 USP5P45974 858 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 HERVK_113P62684 666 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 JAG1P78504 1218 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 CEP85Q6P2H3 762 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 MIGA1Q8NAN2 632 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 EAF2Q96CJ1 260 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-210ENST00000550513 CRISPLD2Q9H0B8 497 aa13.24□□□□□ -0.29
PFDN5-210ENST00000550513 ZNFX1Q9P2E3 1918 aaKnown RBP13.23□□□□□ -0.29
PFDN5-210ENST00000550513 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
PFDN5-210ENST00000550513 ANKLE1Q8NAG6 615 aa13.23□□□□□ -0.29
PFDN5-210ENST00000550513 TRIB2Q92519 343 aa13.23□□□□□ -0.29
PFDN5-210ENST00000550513 PAWRQ96IZ0 340 aaKnown RBP13.23□□□□□ -0.29
PFDN5-210ENST00000550513 HMX1Q9NP08 348 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-210ENST00000550513 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
PFDN5-210ENST00000550513 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
PFDN5-210ENST00000550513 RPTORQ8N122 1335 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 MAP3K12Q12852 859 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 TRIM32Q13049 653 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 NECAB2Q7Z6G3 386 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 AACSQ86V21 672 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 GPRC5AQ8NFJ5 357 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 DIS3LQ8TF46 1054 aaKnown RBP13.22□□□□□ -0.29
PFDN5-210ENST00000550513 GTF3C2Q8WUA4 911 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-210ENST00000550513 FEZ1Q99689 392 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 EHD4Q9H223 541 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 SERPINB13Q9UIV8 391 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
PFDN5-210ENST00000550513 ZBED9Q6R2W3 1325 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 LTBP2Q14767 1821 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 PEX10O60683 326 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 GH2P01242 217 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 CYP2B6P20813 491 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 MAPK4P31152 587 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 ERVK-9P63128 1117 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 ERVK-24P63145 666 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
PFDN5-210ENST00000550513 TMED8Q6PL24 325 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-210ENST00000550513 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 CCAR1Q8IX12 1150 aaKnown RBP13.21□□□□□ -0.29
PFDN5-210ENST00000550513 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
PFDN5-210ENST00000550513 NUDT12Q9BQG2 462 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 PAGR1Q9BTK6 254 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 PRO3102Q9H379 93 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 ANTXR1Q9H6X2 564 aa13.21□□□□□ -0.29
PFDN5-210ENST00000550513 MYH4Q9Y623 1939 aa13.21□□□□□ -0.3
PFDN5-210ENST00000550513 LAMA3Q16787 3333 aa13.21□□□□□ -0.3
PFDN5-210ENST00000550513 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
PFDN5-210ENST00000550513 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-210ENST00000550513 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
PFDN5-210ENST00000550513 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
PFDN5-210ENST00000550513 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
PFDN5-210ENST00000550513 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
PFDN5-210ENST00000550513 GREB1LQ9C091 1923 aaPredicted RBP13.19□□□□□ -0.3
PFDN5-210ENST00000550513 A0A1W2PPC1 479 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
PFDN5-210ENST00000550513 RGS2P41220 211 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 USP14P54578 494 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms