RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 COA7Q96BR5 231 aa24.12■■□□□ 1.45
GCN1-207ENST00000550471 HAUS7Q99871 368 aa24.12■■□□□ 1.45
GCN1-207ENST00000550471 CABP5Q9NP86 173 aa24.12■■□□□ 1.45
GCN1-207ENST00000550471 NDUFB9Q9Y6M9 179 aa24.12■■□□□ 1.45
GCN1-207ENST00000550471 MYO5AQ9Y4I1 1855 aaKnown RBP24.11■■□□□ 1.45
GCN1-207ENST00000550471 POLR3DP05423 398 aaPredicted RBP24.11■■□□□ 1.45
GCN1-207ENST00000550471 USP14P54578 494 aa24.11■■□□□ 1.45
GCN1-207ENST00000550471 IRX3P78415 501 aaPredicted RBP24.11■■□□□ 1.45
GCN1-207ENST00000550471 IRF5Q13568 498 aa24.11■■□□□ 1.45
GCN1-207ENST00000550471 RRP1BQ14684 758 aaKnown RBP24.11■■□□□ 1.45
GCN1-207ENST00000550471 TREML2Q5T2D2 321 aa24.11■■□□□ 1.45
GCN1-207ENST00000550471 CDK5RAP2Q96SN8 1893 aa24.11■■□□□ 1.45
GCN1-207ENST00000550471 ZNF532Q9HCE3 1301 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 ATAD5Q96QE3 1844 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 TNPO2O14787 897 aaKnown RBP24.1■■□□□ 1.45
GCN1-207ENST00000550471 MTMR2Q13614 643 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 CERKLQ49MI3 558 aaPredicted RBP24.1■■□□□ 1.45
GCN1-207ENST00000550471 C20orf194Q5TEA3 1177 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 USP17L2Q6R6M4 530 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 CCDC84Q86UT8 332 aaPredicted RBP24.1■■□□□ 1.45
GCN1-207ENST00000550471 AMOTL1Q8IY63 956 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 PXYLP1Q8TE99 480 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 DDRGK1Q96HY6 314 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 DCTPP1Q9H773 170 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.1■■□□□ 1.45
GCN1-207ENST00000550471 LOC285556D6RIA3 1793 aa24.1■■□□□ 1.45
GCN1-207ENST00000550471 KIAA0100Q14667 2235 aaKnown RBP24.1■■□□□ 1.45
GCN1-207ENST00000550471 POTEFA5A3E0 1075 aa24.09■■□□□ 1.45
GCN1-207ENST00000550471 CTGFP29279 349 aa24.09■■□□□ 1.45
GCN1-207ENST00000550471 UBE3CQ15386 1083 aa24.09■■□□□ 1.45
GCN1-207ENST00000550471 ANKRD13CQ8N6S4 541 aa24.09■■□□□ 1.45
GCN1-207ENST00000550471 ASCC2Q9H1I8 757 aaPredicted RBP24.09■■□□□ 1.45
GCN1-207ENST00000550471 BOLA2Q9H3K6 86 aa24.09■■□□□ 1.45
GCN1-207ENST00000550471 ATP8A2Q9NTI2 1148 aa24.09■■□□□ 1.45
GCN1-207ENST00000550471 SIPA1L1O43166 1804 aa24.08■■□□□ 1.45
GCN1-207ENST00000550471 TCRBV5S4A2TA0A5A2 114 aa24.08■■□□□ 1.45
GCN1-207ENST00000550471 ECHDC1Q9NTX5 307 aa24.08■■□□□ 1.45
GCN1-207ENST00000550471 SWAP70Q9UH65 585 aa24.08■■□□□ 1.45
GCN1-207ENST00000550471 MYH1P12882 1939 aa24.08■■□□□ 1.44
GCN1-207ENST00000550471 GDF11O95390 407 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 ADD2P35612 726 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 PRKCZQ05513 592 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 ABCB5Q2M3G0 1257 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 LRRFIP1Q32MZ4 808 aaKnown RBP24.07■■□□□ 1.44
GCN1-207ENST00000550471 SH3TC2Q8TF17 1288 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 C12orf42Q96LP6 360 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 MCM9Q9NXL9 1143 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 MORF4L1Q9UBU8 362 aa24.07■■□□□ 1.44
GCN1-207ENST00000550471 GH2P01242 217 aa24.06■■□□□ 1.44
GCN1-207ENST00000550471 BIN2Q9UBW5 565 aaPredicted RBP24.06■■□□□ 1.44
GCN1-207ENST00000550471 FEZ1Q99689 392 aa24.05■■□□□ 1.44
GCN1-207ENST00000550471 DCP1AQ9NPI6 582 aaPredicted RBP24.05■■□□□ 1.44
GCN1-207ENST00000550471 ADCY3O60266 1144 aa24.04■■□□□ 1.44
GCN1-207ENST00000550471 EN2P19622 333 aaPredicted RBP24.04■■□□□ 1.44
GCN1-207ENST00000550471 FLT3LGP49771 235 aa24.04■■□□□ 1.44
GCN1-207ENST00000550471 GABPAQ06546 454 aa24.04■■□□□ 1.44
GCN1-207ENST00000550471 GCC1Q96CN9 775 aa24.04■■□□□ 1.44
GCN1-207ENST00000550471 KIAA1683Q9H0B3 1180 aa24.04■■□□□ 1.44
GCN1-207ENST00000550471 GJB1P08034 283 aa24.03■■□□□ 1.44
GCN1-207ENST00000550471 PLCD1P51178 756 aa24.03■■□□□ 1.44
GCN1-207ENST00000550471 AAMPQ13685 434 aa24.03■■□□□ 1.44
GCN1-207ENST00000550471 GPRC5AQ8NFJ5 357 aa24.03■■□□□ 1.44
GCN1-207ENST00000550471 BCL11AQ9H165 835 aa24.03■■□□□ 1.44
GCN1-207ENST00000550471 MGAMO43451 1857 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L15C9J2P7 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L13C9JLJ4 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L11C9JVI0 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L18D6R9N7 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L22D6RA61 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L17D6RBQ6 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L19D6RCP7 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L20D6RJB6 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 SHMT1P34896 483 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 HERVK_113P62684 666 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 USP17L24Q0WX57 530 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 RAB3GAP1Q15042 981 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 LCORLQ8N3X6 602 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 CCDC17Q96LX7 622 aa24.02■■□□□ 1.44
GCN1-207ENST00000550471 ZFYP08048 801 aaPredicted RBP24.01■■□□□ 1.43
GCN1-207ENST00000550471 MAPK4P31152 587 aa24.01■■□□□ 1.43
GCN1-207ENST00000550471 JAG1P78504 1218 aa24.01■■□□□ 1.43
GCN1-207ENST00000550471 EMILIN3Q9NT22 766 aa24.01■■□□□ 1.43
GCN1-207ENST00000550471 GABRQQ9UN88 632 aa24.01■■□□□ 1.43
GCN1-207ENST00000550471 ERC2O15083 957 aa24■■□□□ 1.43
GCN1-207ENST00000550471 ECM2O94769 699 aaPredicted RBP24■■□□□ 1.43
GCN1-207ENST00000550471 MBD4O95243 580 aa24■■□□□ 1.43
GCN1-207ENST00000550471 GJA8P48165 433 aa24■■□□□ 1.43
GCN1-207ENST00000550471 CCNA1P78396 465 aa24■■□□□ 1.43
GCN1-207ENST00000550471 TMEM179Q6ZVK1 233 aa24■■□□□ 1.43
GCN1-207ENST00000550471 CCAR1Q8IX12 1150 aaKnown RBP24■■□□□ 1.43
GCN1-207ENST00000550471 TRMT44Q8IYL2 757 aaKnown RBP24■■□□□ 1.43
GCN1-207ENST00000550471 SDR42E1Q8WUS8 393 aa24■■□□□ 1.43
GCN1-207ENST00000550471 SOCS4Q8WXH5 440 aa24■■□□□ 1.43
GCN1-207ENST00000550471 EDC3Q96F86 508 aaKnown RBP24■■□□□ 1.43
GCN1-207ENST00000550471 P2RX7Q99572 595 aaKnown RBP24■■□□□ 1.43
GCN1-207ENST00000550471 RNF208Q9H0X6 261 aa24■■□□□ 1.43
GCN1-207ENST00000550471 SH2D4AQ9H788 454 aa24■■□□□ 1.43
GCN1-207ENST00000550471 ARMT1Q9H993 441 aa24■■□□□ 1.43
GCN1-207ENST00000550471 ZBTB47Q9UFB7 747 aaPredicted RBP24■■□□□ 1.43
GCN1-207ENST00000550471 TTC41PQ6P2S7 1318 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms