RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 KIRREL1Q96J84 757 aa5.19□□□□□ -1.58
CCNT1-203ENST00000550457 MIPEPQ99797 713 aa5.19□□□□□ -1.58
CCNT1-203ENST00000550457 WNT10AQ9GZT5 417 aa5.19□□□□□ -1.58
CCNT1-203ENST00000550457 TPX2Q9ULW0 747 aaKnown RBP5.19□□□□□ -1.58
CCNT1-203ENST00000550457 GIPC1O14908 333 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 TSPAN15O95858 294 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 USP17L7P0C7H9 530 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 GDNFP39905 211 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 CAP2P40123 477 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 RAP1GAPP47736 663 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 PDE4CQ08493 712 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 SFRP5Q5T4F7 317 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 LCNL1Q6ZST4 164 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 C12orf49Q9H741 205 aa5.18□□□□□ -1.58
CCNT1-203ENST00000550457 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 TMEM67Q5HYA8 995 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 WIPI1Q5MNZ9 446 aaPredicted RBP5.17□□□□□ -1.58
CCNT1-203ENST00000550457 ALG1LQ6GMV1 187 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 LETMD1Q6P1Q0 360 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 SYDE1Q6ZW31 735 aaPredicted RBP5.17□□□□□ -1.58
CCNT1-203ENST00000550457 HDXQ7Z353 690 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 NPAS4Q8IUM7 802 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 KCNK12Q9HB15 430 aa5.17□□□□□ -1.58
CCNT1-203ENST00000550457 SUPT5HO00267 1087 aaKnown RBP5.16□□□□□ -1.58
CCNT1-203ENST00000550457 BRD1O95696 1058 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 CBX7O95931 251 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 ETF1P62495 437 aaKnown RBP5.16□□□□□ -1.58
CCNT1-203ENST00000550457 PRAMEF13Q5VWM6 474 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 MPZL3Q6UWV2 235 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 HID1Q8IV36 788 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 MFSD2AQ8NA29 543 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 XAGE3Q8WTP9 111 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 ASB16Q96NS5 453 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 FAM8A1Q9UBU6 413 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 SNCAIPQ9Y6H5 919 aa5.16□□□□□ -1.58
CCNT1-203ENST00000550457 CST3P01034 146 aaPredicted RBP5.15□□□□□ -1.59
CCNT1-203ENST00000550457 P4HBP07237 508 aaKnown RBP5.15□□□□□ -1.59
CCNT1-203ENST00000550457 C1QTNF9P0C862 333 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 GRK4P32298 578 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 ZEB1P37275 1124 aaPredicted RBP5.15□□□□□ -1.59
CCNT1-203ENST00000550457 TTBK2Q6IQ55 1244 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 SV2BQ7L1I2 683 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 THAP5Q7Z6K1 395 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 LRRC56Q8IYG6 542 aaPredicted RBP5.15□□□□□ -1.59
CCNT1-203ENST00000550457 UBE2FQ969M7 185 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 TOX2Q96NM4 488 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 ALPK1Q96QP1 1244 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 DIRC2Q96SL1 478 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 PPP1R16BQ96T49 567 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 SPG7Q9UQ90 795 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 PCDHB5Q9Y5E4 795 aa5.15□□□□□ -1.59
CCNT1-203ENST00000550457 DNAJC25-GNG10A0A024R161 153 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 WASH4PA8MWX3 477 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 GFRA2O00451 464 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 ESR1P03372 595 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 TNK2Q07912 1038 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 SEPT6Q14141 434 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 RALGPS1Q5JS13 557 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 CDH24Q86UP0 819 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 ZSCAN29Q8IWY8 852 aaPredicted RBP5.14□□□□□ -1.59
CCNT1-203ENST00000550457 NSUN3Q9H649 340 aaKnown RBP5.14□□□□□ -1.59
CCNT1-203ENST00000550457 SLAMF8Q9P0V8 285 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 ZSWIM5Q9P217 1185 aa5.14□□□□□ -1.59
CCNT1-203ENST00000550457 TTF2Q9UNY4 1162 aaKnown RBP5.14□□□□□ -1.59
CCNT1-203ENST00000550457 ERVFC1P60507 584 aa5.13□□□□□ -1.59
CCNT1-203ENST00000550457 TTC6Q86TZ1 520 aa5.13□□□□□ -1.59
CCNT1-203ENST00000550457 FBXO15Q8NCQ5 510 aaPredicted RBP5.13□□□□□ -1.59
CCNT1-203ENST00000550457 DPH2Q9BQC3 489 aaPredicted RBP5.13□□□□□ -1.59
CCNT1-203ENST00000550457 TJP2Q9UDY2 1190 aa5.13□□□□□ -1.59
CCNT1-203ENST00000550457 DCAF1Q9Y4B6 1507 aa5.13□□□□□ -1.59
CCNT1-203ENST00000550457 ZSCAN22P10073 491 aaPredicted RBP5.12□□□□□ -1.59
CCNT1-203ENST00000550457 ATP2B2Q01814 1243 aa5.12□□□□□ -1.59
CCNT1-203ENST00000550457 ANKLE2Q86XL3 938 aa5.12□□□□□ -1.59
CCNT1-203ENST00000550457 Q96M66 194 aa5.12□□□□□ -1.59
CCNT1-203ENST00000550457 RNF19AQ9NV58 838 aa5.12□□□□□ -1.59
CCNT1-203ENST00000550457 IVNS1ABPQ9Y6Y0 642 aa5.12□□□□□ -1.59
CCNT1-203ENST00000550457 LDHBP07195 334 aaKnown RBP5.11□□□□□ -1.59
CCNT1-203ENST00000550457 KIR3DL1P43629 444 aa5.11□□□□□ -1.59
CCNT1-203ENST00000550457 RPS26P62854 115 aaKnown RBP5.11□□□□□ -1.59
CCNT1-203ENST00000550457 ZNF746Q6NUN9 644 aaPredicted RBP5.11□□□□□ -1.59
CCNT1-203ENST00000550457 MRPL41Q8IXM3 137 aaKnown RBP5.11□□□□□ -1.59
CCNT1-203ENST00000550457 DNAJB8Q8NHS0 232 aa5.11□□□□□ -1.59
CCNT1-203ENST00000550457 ABHD4Q8TB40 342 aa5.11□□□□□ -1.59
CCNT1-203ENST00000550457 ZSCAN18Q8TBC5 510 aaPredicted RBP5.11□□□□□ -1.59
CCNT1-203ENST00000550457 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
CCNT1-203ENST00000550457 ADAMTS10Q9H324 1103 aa5.11□□□□□ -1.59
CCNT1-203ENST00000550457 NPIPB6E9PJ23 425 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 NFIBO00712 420 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 TRHRP34981 398 aaPredicted RBP5.1□□□□□ -1.59
CCNT1-203ENST00000550457 HK2P52789 917 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 CCDC85BQ15834 202 aaPredicted RBP5.1□□□□□ -1.59
CCNT1-203ENST00000550457 GAB4Q2WGN9 574 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 AGMOQ6ZNB7 445 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 TMPRSS7Q7RTY8 843 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 SIAH1Q8IUQ4 282 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 CCDC120Q96HB5 630 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 TMEM87BQ96K49 555 aa5.1□□□□□ -1.59
CCNT1-203ENST00000550457 DUSP15Q9H1R2 295 aaPredicted RBP5.1□□□□□ -1.59
CCNT1-203ENST00000550457 SP110Q9HB58 689 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms