RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 PPP1R9AQ9ULJ8 1098 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 AP4E1Q9UPM8 1137 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 SUSD5O60279 629 aa8.08□□□□□ -1.12
HCFC2-204ENST00000550335 RAB11FIP3O75154 756 aa8.08□□□□□ -1.12
HCFC2-204ENST00000550335 TDRD10Q5VZ19 366 aaKnown RBP8.08□□□□□ -1.12
HCFC2-204ENST00000550335 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
HCFC2-204ENST00000550335 SPATA9Q9BWV2 254 aa8.08□□□□□ -1.12
HCFC2-204ENST00000550335 PCDH12Q9NPG4 1184 aa8.08□□□□□ -1.12
HCFC2-204ENST00000550335 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
HCFC2-204ENST00000550335 ADAM30Q9UKF2 790 aa8.08□□□□□ -1.12
HCFC2-204ENST00000550335 SHISA8B8ZZ34 492 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 DLL1O00548 723 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 LCE2BO14633 110 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 TNFRSF10CO14798 259 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 TCEA2Q15560 299 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 NUTM2GQ5VZR2 741 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 NPAS3Q8IXF0 933 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 ZNF507Q8TCN5 953 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 XAGE3Q8WTP9 111 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 TMEM87BQ96K49 555 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 FEZ1Q99689 392 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 RUSC1Q9BVN2 902 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 LRP2BPQ9P2M1 347 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 PRKAB1Q9Y478 270 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 CD2APQ9Y5K6 639 aa8.07□□□□□ -1.12
HCFC2-204ENST00000550335 ERBB4Q15303 1308 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 AGRPO00253 132 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 OIP5O43482 229 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 DEAF1O75398 565 aaPredicted RBP8.06□□□□□ -1.12
HCFC2-204ENST00000550335 HCLS1P14317 486 aaPredicted RBP8.06□□□□□ -1.12
HCFC2-204ENST00000550335 ERVK-24P63145 666 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 ZBTB37Q5TC79 503 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 DYMQ7RTS9 669 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 KIAA0907Q7Z7F0 614 aaPredicted RBP8.06□□□□□ -1.12
HCFC2-204ENST00000550335 HID1Q8IV36 788 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 MCATQ8IVS2 390 aaKnown RBP8.06□□□□□ -1.12
HCFC2-204ENST00000550335 ZSWIM2Q8NEG5 633 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 SLC6A18Q96N87 628 aa8.06□□□□□ -1.12
HCFC2-204ENST00000550335 IQCA1LA6NCM1 817 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 TERTO14746 1132 aaKnown RBP8.05□□□□□ -1.12
HCFC2-204ENST00000550335 FANCGO15287 622 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 TMPRSS2O15393 492 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 BCRP11274 1271 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 NID1P14543 1247 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 KRT76Q01546 638 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 LRRC47Q8N1G4 583 aaKnown RBP8.05□□□□□ -1.12
HCFC2-204ENST00000550335 C12orf50Q8NA57 414 aaPredicted RBP8.05□□□□□ -1.12
HCFC2-204ENST00000550335 BAHD1Q8TBE0 780 aaPredicted RBP8.05□□□□□ -1.12
HCFC2-204ENST00000550335 KLHL6Q8WZ60 621 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 DHRS1Q96LJ7 313 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 CDC6Q99741 560 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 FBRSQ9HAH7 460 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 PIDD1Q9HB75 910 aa8.05□□□□□ -1.12
HCFC2-204ENST00000550335 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
HCFC2-204ENST00000550335 MARCH6O60337 910 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 DRD2P14416 443 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 CNGA1P29973 690 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 L1CAMP32004 1257 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 MASP1P48740 699 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 TTLL4Q14679 1199 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 SLC10A6Q3KNW5 377 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 SLC6A19Q695T7 634 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 ACAD11Q709F0 780 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 ADAT2Q7Z6V5 191 aaKnown RBP8.04□□□□□ -1.12
HCFC2-204ENST00000550335 TMEM192Q8IY95 271 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 ZNF512BQ96KM6 892 aaPredicted RBP8.04□□□□□ -1.12
HCFC2-204ENST00000550335 CCDC74BQ96LY2 380 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 IPO9Q96P70 1041 aaKnown RBP8.04□□□□□ -1.12
HCFC2-204ENST00000550335 FANCD2OSQ96PS1 177 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 APBA2Q99767 749 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 DISC1Q9NRI5 854 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 CRIM1Q9NZV1 1036 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 PCDHGC5Q9Y5F6 944 aa8.04□□□□□ -1.12
HCFC2-204ENST00000550335 TM4SF5O14894 197 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 WISP1O95388 367 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 RAC1P63000 192 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 RING1Q06587 406 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 NKG7Q16617 165 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 BBS9Q3SYG4 887 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 HEATR6Q6AI08 1181 aaKnown RBP8.03□□□□□ -1.12
HCFC2-204ENST00000550335 DHX37Q8IY37 1157 aaKnown RBP8.03□□□□□ -1.12
HCFC2-204ENST00000550335 CCDC144CPQ8IYA2 1237 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 ZBTB38Q8NAP3 1195 aaPredicted RBP8.03□□□□□ -1.12
HCFC2-204ENST00000550335 RNF214Q8ND24 703 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 NEDD1Q8NHV4 660 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 IRF7Q92985 503 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 FGD4Q96M96 766 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 ATXN3LQ9H3M9 355 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 CYP4F12Q9HCS2 524 aa8.03□□□□□ -1.12
HCFC2-204ENST00000550335 RGS13O14921 159 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 CLEC3AO75596 197 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 VSIG8P0DPA2 414 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 ZNF787Q6DD87 383 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 LYPD4Q6UWN0 246 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 LRRN4CLQ8ND94 238 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 DCAF11Q8TEB1 546 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 ZNF669Q96BR6 464 aaPredicted RBP8.02□□□□□ -1.13
HCFC2-204ENST00000550335 SLC26A8Q96RN1 970 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 BRINP2Q9C0B6 783 aa8.02□□□□□ -1.13
HCFC2-204ENST00000550335 PRDM6Q9NQX0 595 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms