RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 WRNIP1Q96S55 665 aa10.64□□□□□ -0.71
CACNB3-215ENST00000550190 CNNM2Q9H8M5 875 aa10.64□□□□□ -0.71
CACNB3-215ENST00000550190 CABP5Q9NP86 173 aa10.64□□□□□ -0.71
CACNB3-215ENST00000550190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.64□□□□□ -0.71
CACNB3-215ENST00000550190 DOCK1Q14185 1865 aa10.64□□□□□ -0.71
CACNB3-215ENST00000550190 OTOFQ9HC10 1997 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 UBE2Q2LH0YL09 131 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 ORC4O43929 436 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 PCP11498 1178 aaKnown RBP10.63□□□□□ -0.71
CACNB3-215ENST00000550190 AKR1B1P15121 316 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 CASTP20810 708 aaKnown RBP10.63□□□□□ -0.71
CACNB3-215ENST00000550190 PSMA5P28066 241 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 INPP5BP32019 993 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 CAP2P40123 477 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 IREB2P48200 963 aaKnown RBP10.63□□□□□ -0.71
CACNB3-215ENST00000550190 MAP3K9P80192 1104 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 MAP3K10Q02779 954 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 FSTL1Q12841 308 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 RRP1BQ14684 758 aaKnown RBP10.63□□□□□ -0.71
CACNB3-215ENST00000550190 ABCB5Q2M3G0 1257 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 TATDN1Q6P1N9 297 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 ESR2Q92731 530 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 KCNB2Q92953 911 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 ZKSCAN4Q969J2 545 aaPredicted RBP10.63□□□□□ -0.71
CACNB3-215ENST00000550190 CCDC17Q96LX7 622 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 GBA2Q9HCG7 927 aaPredicted RBP10.63□□□□□ -0.71
CACNB3-215ENST00000550190 ZSWIM5Q9P217 1185 aa10.63□□□□□ -0.71
CACNB3-215ENST00000550190 MYH4Q9Y623 1939 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 GH2P01242 217 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 FGRP09769 529 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 CPA1P15085 419 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 RBM25P49756 843 aaKnown RBP10.62□□□□□ -0.71
CACNB3-215ENST00000550190 ANAPC15P60006 121 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 ATP2B2Q01814 1243 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 RAB3GAP1Q15042 981 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
CACNB3-215ENST00000550190 CST9Q5W186 159 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 BLOC1S2Q6QNY1 142 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 CYB5R4Q7L1T6 521 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 NKX2-3Q8TAU0 364 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 KLRG1Q96E93 195 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 CSADQ9Y600 493 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 PAPPA2Q9BXP8 1791 aa10.62□□□□□ -0.71
CACNB3-215ENST00000550190 PASKQ96RG2 1323 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
CACNB3-215ENST00000550190 MCM5P33992 734 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 JAG1P78504 1218 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 SEPT2Q15019 361 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 CCDC84Q86UT8 332 aaPredicted RBP10.61□□□□□ -0.71
CACNB3-215ENST00000550190 IQCA1Q86XH1 822 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 MB21D2Q8IYB1 491 aaPredicted RBP10.61□□□□□ -0.71
CACNB3-215ENST00000550190 ANKRD13AQ8IZ07 590 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 SCYL3Q8IZE3 742 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.61□□□□□ -0.71
CACNB3-215ENST00000550190 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 TCEANC2Q96MN5 208 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 TBC1D32Q96NH3 1257 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 UBAC1Q9BSL1 405 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 LRRC2Q9BYS8 371 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 UPF3BQ9BZI7 483 aaKnown RBP10.61□□□□□ -0.71
CACNB3-215ENST00000550190 ELP3Q9H9T3 547 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 PICK1Q9NRD5 415 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.61□□□□□ -0.71
CACNB3-215ENST00000550190 ZBTB21Q9ULJ3 1066 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 CYP46A1Q9Y6A2 500 aa10.61□□□□□ -0.71
CACNB3-215ENST00000550190 ERICH2A1L162 156 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 IFIT3O14879 490 aaKnown RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 PRC1O43663 620 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 NMT2O60551 498 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 ASNSP08243 561 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 HMGB1P09429 215 aaKnown RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 FKBP1BP68106 108 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 FGD1P98174 961 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 COL9A3Q14050 684 aaPredicted RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 VGLL4Q14135 290 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 MAP3K11Q16584 847 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 TMEM179Q6ZVK1 233 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 RUFY3Q7L099 469 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 CLEC10AQ8IUN9 316 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 CLMNQ96JQ2 1002 aa10.6□□□□□ -0.71
CACNB3-215ENST00000550190 ABT1Q9ULW3 272 aaKnown RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 GREB1LQ9C091 1923 aaPredicted RBP10.6□□□□□ -0.71
CACNB3-215ENST00000550190 TMEM88BA6NKF7 163 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 USP17L5A8MUK1 530 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 GUCY1A2P33402 732 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 NEK4P51957 841 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 HUNKP57058 714 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 ANTXR2P58335 489 aa10.59□□□□□ -0.71
CACNB3-215ENST00000550190 SART3Q15020 963 aaKnown RBP10.59□□□□□ -0.71
CACNB3-215ENST00000550190 TMEM67Q5HYA8 995 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms