RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
TRAFD1-207ENST00000550051 BAG3O95817 575 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 GNAI2P04899 355 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 PLCG2P16885 1265 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 TRIM32Q13049 653 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 G3BP1Q13283 466 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 GPRC5AQ8NFJ5 357 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 NOL10Q9BSC4 688 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 GPR108Q9NPR9 543 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 RBPJLQ9UBG7 517 aa12.12□□□□□ -0.47
TRAFD1-207ENST00000550051 USP17L10C9JJH3 530 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 DLL1O00548 723 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 IPO8O15397 1037 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 HERVK_113P62684 666 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 IRX3P78415 501 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 JAG1P78504 1218 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 LRIT3Q3SXY7 679 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 TRIB2Q92519 343 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 USP6NLQ92738 828 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 NUDT12Q9BQG2 462 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 C11orf49Q9H6J7 331 aa12.11□□□□□ -0.47
TRAFD1-207ENST00000550051 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 PNMA6EA0A0J9YXQ4 647 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 CYP2B6P20813 491 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 MAPK4P31152 587 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 MTMR2Q13614 643 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 Q3C1V9 767 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 NAA16Q6N069 864 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 C7orf61Q8IZ16 206 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 GTF3C2Q8WUA4 911 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 TXNRD2Q9NNW7 524 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 CDK5RAP2Q96SN8 1893 aa12.1□□□□□ -0.47
TRAFD1-207ENST00000550051 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 DDX60LQ5H9U9 1706 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 COL6A3P12111 3177 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 LAMA3Q16787 3333 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 CYP2E1P05181 493 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 COL6A1P12109 1028 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 CCDC158Q5M9N0 1113 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 LHX8Q68G74 356 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 DNAJC18Q9H819 358 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 AATFQ9NY61 560 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 PALD1Q9ULE6 856 aa12.09□□□□□ -0.47
TRAFD1-207ENST00000550051 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 TRIM27P14373 513 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 ERVK-9P63128 1117 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 ERVK-24P63145 666 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 CACNB2Q08289 660 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 MORN1Q5T089 497 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 ATF7IPQ6VMQ6 1270 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 ZBTB21Q9ULJ3 1066 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 ZMYND8Q9ULU4 1186 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 MYO5AQ9Y4I1 1855 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 FLT1P17948 1338 aa12.08□□□□□ -0.48
TRAFD1-207ENST00000550051 PEX10O60683 326 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 RGS2P41220 211 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 MAGEA10P43363 369 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 TNNI3KQ59H18 835 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 TTC39AQ5SRH9 613 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 TATDN1Q6P1N9 297 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L2Q6R6M4 530 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 GPR142Q7Z601 462 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 ADGRA1Q86SQ6 560 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 TDHQ8IZJ6 230 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 CRACR2BQ8N4Y2 399 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 DEFB123Q8N688 67 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 SSH3Q8TE77 659 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 C12orf42Q96LP6 360 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 TRIM34Q9BYJ4 488 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 FPGT-TNNI3KV9GXZ4 949 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 PFASO15067 1338 aa12.07□□□□□ -0.48
TRAFD1-207ENST00000550051 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 SYN1P17600 705 aa12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 CERS3Q8IU89 383 aa12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 CCAR1Q8IX12 1150 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 DBNDD2Q9BQY9 259 aa12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 PORCNQ9H237 461 aa12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 MTMR10Q9NXD2 777 aa12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 STXBP5LQ9Y2K9 1186 aa12.06□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L15C9J2P7 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L13C9JLJ4 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L11C9JVI0 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L18D6R9N7 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L22D6RA61 530 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms