RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 PAPPAQ13219 1627 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 USP42Q9H9J4 1324 aaKnown RBP6.52□□□□□ -1.37
KRR1-203ENST00000550023 MTX1Q13505 466 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 TPRNQ4KMQ1 711 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 ANKRD45Q5TZF3 282 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.52□□□□□ -1.37
KRR1-203ENST00000550023 VSIG10LQ86VR7 867 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 ARHGEF25Q86VW2 580 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 CLEC10AQ8IUN9 316 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 KSR1Q8IVT5 923 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 ABTB2Q8N961 1025 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 SMG9Q9H0W8 520 aaKnown RBP6.52□□□□□ -1.37
KRR1-203ENST00000550023 C1orf115Q9H7X2 142 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 COL18A1P39060 1754 aa6.52□□□□□ -1.37
KRR1-203ENST00000550023 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 FRAT2O75474 233 aaPredicted RBP6.51□□□□□ -1.37
KRR1-203ENST00000550023 ARID4AP29374 1257 aaPredicted RBP6.51□□□□□ -1.37
KRR1-203ENST00000550023 ANAPC15P60006 121 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 PLAURQ03405 335 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 RAB3GAP1Q15042 981 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 TAF7Q15545 349 aaPredicted RBP6.51□□□□□ -1.37
KRR1-203ENST00000550023 HIF1AQ16665 826 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 KRT24Q2M2I5 525 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 L1TD1Q5T7N2 865 aaKnown RBP6.51□□□□□ -1.37
KRR1-203ENST00000550023 BTLAQ7Z6A9 289 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 GBP4Q96PP9 640 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 CCDC39Q9UFE4 941 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 STAP2Q9UGK3 403 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 RFX7Q2KHR2 1363 aa6.51□□□□□ -1.37
KRR1-203ENST00000550023 KDM6AO15550 1401 aaPredicted RBP6.5□□□□□ -1.37
KRR1-203ENST00000550023 ABCA3Q99758 1704 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 SCN11AQ9UI33 1791 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 FSD2A1L4K1 749 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 FOXO3O43524 673 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 MCM4P33991 863 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 MCM2P49736 904 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 HDGFL1Q5TGJ6 251 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 ZNF280CQ8ND82 737 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 AGBL5Q8NDL9 886 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 SSH3Q8TE77 659 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 MYRFLQ96LU7 910 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 SLC38A3Q99624 504 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 SLKQ9H2G2 1235 aaPredicted RBP6.5□□□□□ -1.37
KRR1-203ENST00000550023 HDAC5Q9UQL6 1122 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 MEGF6O75095 1541 aa6.5□□□□□ -1.37
KRR1-203ENST00000550023 PLCH1Q4KWH8 1693 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 ADCY9O60503 1353 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 ELL2O00472 640 aaPredicted RBP6.49□□□□□ -1.37
KRR1-203ENST00000550023 BIN1O00499 593 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 ERC2O15083 957 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 GPR37L1O60883 481 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 RAB11FIP3O75154 756 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 ALDH1L1O75891 902 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 MAP3K6O95382 1288 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 HSP90AB1P08238 724 aaKnown RBP6.49□□□□□ -1.37
KRR1-203ENST00000550023 MX1P20591 662 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 HOXA10P31260 410 aaPredicted RBP6.49□□□□□ -1.37
KRR1-203ENST00000550023 EIF4A1P60842 406 aaKnown RBP6.49□□□□□ -1.37
KRR1-203ENST00000550023 FKBP5Q13451 457 aaPredicted RBP6.49□□□□□ -1.37
KRR1-203ENST00000550023 HSP90AB4PQ58FF6 505 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 TBCELQ5QJ74 424 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 PLPP7Q8NBV4 271 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 IL17REQ8NFR9 667 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 TRPM4Q8TD43 1214 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 FAM83CQ9BQN1 747 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 LRRCC1Q9C099 1032 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 PHACTR1Q9C0D0 580 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 ATG3Q9NT62 314 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 LEMD3Q9Y2U8 911 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 TNS2Q63HR2 1409 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 UBR2Q8IWV8 1755 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 UTYO14607 1347 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 NPHP3Q7Z494 1330 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 C5P01031 1676 aa6.49□□□□□ -1.37
KRR1-203ENST00000550023 LRP6O75581 1613 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 CYP2E1P05181 493 aaPredicted RBP6.48□□□□□ -1.37
KRR1-203ENST00000550023 UBTFL1P0CB47 393 aaPredicted RBP6.48□□□□□ -1.37
KRR1-203ENST00000550023 SDSP20132 328 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 PDE1AP54750 535 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 PSME1Q06323 249 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 PLEKHO1Q53GL0 409 aaPredicted RBP6.48□□□□□ -1.37
KRR1-203ENST00000550023 SH3PXD2AQ5TCZ1 1133 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 DHX32Q7L7V1 743 aaKnown RBP6.48□□□□□ -1.37
KRR1-203ENST00000550023 IL22RA1Q8N6P7 574 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 KCNF1Q9H3M0 494 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 HCN4Q9Y3Q4 1203 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 STRCP1A6NGW2 1772 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 TTC41PQ6P2S7 1318 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 RAD50Q92878 1312 aa6.48□□□□□ -1.37
KRR1-203ENST00000550023 TMEM94Q12767 1356 aa6.47□□□□□ -1.37
KRR1-203ENST00000550023 JCADQ9P266 1359 aa6.47□□□□□ -1.37
KRR1-203ENST00000550023 GCP02774 474 aa6.47□□□□□ -1.37
KRR1-203ENST00000550023 PRNPP04156 253 aa6.47□□□□□ -1.37
KRR1-203ENST00000550023 EIF2AK2P19525 551 aaKnown RBP6.47□□□□□ -1.37
KRR1-203ENST00000550023 MCCP23508 829 aa6.47□□□□□ -1.37
KRR1-203ENST00000550023 PSMA6P60900 246 aaKnown RBP6.47□□□□□ -1.37
KRR1-203ENST00000550023 GPLD1P80108 840 aa6.47□□□□□ -1.37
KRR1-203ENST00000550023 NUCB2P80303 420 aa6.47□□□□□ -1.37
KRR1-203ENST00000550023 ATP8B2P98198 1209 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms