RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 OSBPP22059 807 aa29.21■■■□□ 2.27
USP44-205ENST00000549639 CTGFP29279 349 aa29.21■■■□□ 2.27
USP44-205ENST00000549639 TMOD4Q9NZQ9 345 aa29.21■■■□□ 2.27
USP44-205ENST00000549639 RBBP6Q7Z6E9 1792 aaKnown RBP29.21■■■□□ 2.27
USP44-205ENST00000549639 GCLCP48506 637 aaPredicted RBP29.2■■■□□ 2.26
USP44-205ENST00000549639 TAOK2Q9UL54 1235 aa29.2■■■□□ 2.26
USP44-205ENST00000549639 ZSWIM8A7E2V4 1837 aa29.2■■■□□ 2.26
USP44-205ENST00000549639 USP17L10C9JJH3 530 aa29.19■■■□□ 2.26
USP44-205ENST00000549639 GDF11O95390 407 aa29.19■■■□□ 2.26
USP44-205ENST00000549639 RAET1EQ8TD07 263 aa29.19■■■□□ 2.26
USP44-205ENST00000549639 MYPNQ86TC9 1320 aa29.19■■■□□ 2.26
USP44-205ENST00000549639 POLR3DP05423 398 aaPredicted RBP29.18■■■□□ 2.26
USP44-205ENST00000549639 ADD2P35612 726 aa29.18■■■□□ 2.26
USP44-205ENST00000549639 JAG1P78504 1218 aa29.18■■■□□ 2.26
USP44-205ENST00000549639 MTMR2Q13614 643 aa29.18■■■□□ 2.26
USP44-205ENST00000549639 FAM110CQ1W6H9 321 aa29.18■■■□□ 2.26
USP44-205ENST00000549639 SLC4A8Q2Y0W8 1093 aa29.18■■■□□ 2.26
USP44-205ENST00000549639 ZSCAN25Q6NSZ9 544 aa29.18■■■□□ 2.26
USP44-205ENST00000549639 EDC3Q96F86 508 aaKnown RBP29.18■■■□□ 2.26
USP44-205ENST00000549639 ECHDC1Q9NTX5 307 aa29.18■■■□□ 2.26
USP44-205ENST00000549639 PDE4DIPQ5VU43 2346 aa29.17■■■□□ 2.26
USP44-205ENST00000549639 POTEFA5A3E0 1075 aa29.17■■■□□ 2.26
USP44-205ENST00000549639 GPATCH3Q96I76 525 aa29.17■■■□□ 2.26
USP44-205ENST00000549639 KIAA0100Q14667 2235 aaKnown RBP29.17■■■□□ 2.26
USP44-205ENST00000549639 SMARCA5O60264 1052 aaPredicted RBP29.16■■■□□ 2.26
USP44-205ENST00000549639 HOXA7P31268 230 aaPredicted RBP29.16■■■□□ 2.26
USP44-205ENST00000549639 RRP1P56182 461 aaKnown RBP29.16■■■□□ 2.26
USP44-205ENST00000549639 UBE3CQ15386 1083 aa29.16■■■□□ 2.26
USP44-205ENST00000549639 CERKLQ49MI3 558 aaPredicted RBP29.16■■■□□ 2.26
USP44-205ENST00000549639 MCM9Q9NXL9 1143 aa29.16■■■□□ 2.26
USP44-205ENST00000549639 ECM2O94769 699 aaPredicted RBP29.15■■■□□ 2.26
USP44-205ENST00000549639 GH2P01242 217 aa29.15■■■□□ 2.26
USP44-205ENST00000549639 LCORLQ8N3X6 602 aa29.15■■■□□ 2.26
USP44-205ENST00000549639 ANKRD13CQ8N6S4 541 aa29.15■■■□□ 2.26
USP44-205ENST00000549639 SH3TC2Q8TF17 1288 aa29.15■■■□□ 2.26
USP44-205ENST00000549639 ASCC2Q9H1I8 757 aaPredicted RBP29.15■■■□□ 2.26
USP44-205ENST00000549639 CABP5Q9NP86 173 aa29.15■■■□□ 2.26
USP44-205ENST00000549639 MGAMO43451 1857 aa29.14■■■□□ 2.26
USP44-205ENST00000549639 DDX60LQ5H9U9 1706 aaKnown RBP29.14■■■□□ 2.26
USP44-205ENST00000549639 GRK4P32298 578 aa29.14■■■□□ 2.26
USP44-205ENST00000549639 PLCD1P51178 756 aa29.14■■■□□ 2.26
USP44-205ENST00000549639 DCP1AQ9NPI6 582 aaPredicted RBP29.14■■■□□ 2.26
USP44-205ENST00000549639 ATP8A2Q9NTI2 1148 aa29.14■■■□□ 2.26
USP44-205ENST00000549639 NAV1Q8NEY1 1877 aa29.13■■■□□ 2.25
USP44-205ENST00000549639 TNPO2O14787 897 aaKnown RBP29.13■■■□□ 2.25
USP44-205ENST00000549639 IRX3P78415 501 aaPredicted RBP29.13■■■□□ 2.25
USP44-205ENST00000549639 PRKCZQ05513 592 aa29.13■■■□□ 2.25
USP44-205ENST00000549639 ABCB5Q2M3G0 1257 aa29.13■■■□□ 2.25
USP44-205ENST00000549639 USP17L2Q6R6M4 530 aa29.13■■■□□ 2.25
USP44-205ENST00000549639 GABPAQ06546 454 aa29.12■■■□□ 2.25
USP44-205ENST00000549639 SLAIN1Q8ND83 568 aa29.12■■■□□ 2.25
USP44-205ENST00000549639 SDR42E1Q8WUS8 393 aa29.12■■■□□ 2.25
USP44-205ENST00000549639 COA7Q96BR5 231 aa29.12■■■□□ 2.25
USP44-205ENST00000549639 ARMT1Q9H993 441 aa29.12■■■□□ 2.25
USP44-205ENST00000549639 MBD4O95243 580 aa29.11■■■□□ 2.25
USP44-205ENST00000549639 SHMT1P34896 483 aa29.11■■■□□ 2.25
USP44-205ENST00000549639 USP14P54578 494 aa29.11■■■□□ 2.25
USP44-205ENST00000549639 SHROOM1Q2M3G4 852 aaPredicted RBP29.11■■■□□ 2.25
USP44-205ENST00000549639 GTF3C2Q8WUA4 911 aaPredicted RBP29.11■■■□□ 2.25
USP44-205ENST00000549639 SWAP70Q9UH65 585 aa29.11■■■□□ 2.25
USP44-205ENST00000549639 IRF5Q13568 498 aa29.1■■■□□ 2.25
USP44-205ENST00000549639 AMOTL1Q8IY63 956 aa29.1■■■□□ 2.25
USP44-205ENST00000549639 DDRGK1Q96HY6 314 aa29.1■■■□□ 2.25
USP44-205ENST00000549639 C12orf42Q96LP6 360 aa29.1■■■□□ 2.25
USP44-205ENST00000549639 MORF4L1Q9UBU8 362 aa29.1■■■□□ 2.25
USP44-205ENST00000549639 PCDHB15Q9Y5E8 787 aa29.1■■■□□ 2.25
USP44-205ENST00000549639 EN2P19622 333 aaPredicted RBP29.09■■■□□ 2.25
USP44-205ENST00000549639 UBXN2AP68543 259 aa29.09■■■□□ 2.25
USP44-205ENST00000549639 RAB3GAP1Q15042 981 aa29.09■■■□□ 2.25
USP44-205ENST00000549639 PXYLP1Q8TE99 480 aa29.09■■■□□ 2.25
USP44-205ENST00000549639 EMILIN3Q9NT22 766 aa29.09■■■□□ 2.25
USP44-205ENST00000549639 MYH7P12883 1935 aa29.09■■■□□ 2.25
USP44-205ENST00000549639 FLT3LGP49771 235 aa29.08■■■□□ 2.25
USP44-205ENST00000549639 FEZ1Q99689 392 aa29.08■■■□□ 2.25
USP44-205ENST00000549639 KIAA1683Q9H0B3 1180 aa29.08■■■□□ 2.25
USP44-205ENST00000549639 GABRQQ9UN88 632 aa29.08■■■□□ 2.25
USP44-205ENST00000549639 BRCA2P51587 3418 aa29.07■■■□□ 2.24
USP44-205ENST00000549639 PRPF38BQ5VTL8 546 aaKnown RBP29.07■■■□□ 2.24
USP44-205ENST00000549639 P2RX7Q99572 595 aaKnown RBP29.07■■■□□ 2.24
USP44-205ENST00000549639 BIN2Q9UBW5 565 aaPredicted RBP29.07■■■□□ 2.24
USP44-205ENST00000549639 TTC41PQ6P2S7 1318 aa29.06■■■□□ 2.24
USP44-205ENST00000549639 ADCY3O60266 1144 aa29.06■■■□□ 2.24
USP44-205ENST00000549639 HERVK_113P62684 666 aa29.06■■■□□ 2.24
USP44-205ENST00000549639 KBTBD3Q8NAB2 608 aa29.06■■■□□ 2.24
USP44-205ENST00000549639 NKX2-3Q8TAU0 364 aa29.06■■■□□ 2.24
USP44-205ENST00000549639 LRRFIP1Q32MZ4 808 aaKnown RBP29.05■■■□□ 2.24
USP44-205ENST00000549639 USP17L15C9J2P7 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L13C9JLJ4 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L11C9JVI0 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L18D6R9N7 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L22D6RA61 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L17D6RBQ6 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L19D6RCP7 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L20D6RJB6 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 ERC2O15083 957 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 PRKAB2O43741 272 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 MYCP01106 439 aaPredicted RBP29.04■■■□□ 2.24
USP44-205ENST00000549639 ZFYP08048 801 aaPredicted RBP29.04■■■□□ 2.24
USP44-205ENST00000549639 USP17L24Q0WX57 530 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 SLFNL1Q499Z3 407 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms