RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 LRRC47Q8N1G4 583 aaKnown RBP8.59□□□□□ -1.03
FGD6-205ENST00000549499 VPS33BQ9H267 617 aa8.59□□□□□ -1.03
FGD6-205ENST00000549499 SIPA1L3O60292 1781 aaPredicted RBP8.59□□□□□ -1.03
FGD6-205ENST00000549499 ADAMTSL1Q8N6G6 1762 aa8.59□□□□□ -1.03
FGD6-205ENST00000549499 PRKAR2AP13861 404 aaKnown RBP8.59□□□□□ -1.04
FGD6-205ENST00000549499 MVPQ14764 893 aaKnown RBP8.59□□□□□ -1.04
FGD6-205ENST00000549499 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.04
FGD6-205ENST00000549499 LCORLQ8N3X6 602 aa8.59□□□□□ -1.04
FGD6-205ENST00000549499 ZBTB47Q9UFB7 747 aaPredicted RBP8.59□□□□□ -1.04
FGD6-205ENST00000549499 STX8Q9UNK0 236 aa8.59□□□□□ -1.04
FGD6-205ENST00000549499 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 FARP2O94887 1054 aaPredicted RBP8.58□□□□□ -1.04
FGD6-205ENST00000549499 CCND3P30281 292 aaPredicted RBP8.58□□□□□ -1.04
FGD6-205ENST00000549499 LNPKQ9C0E8 428 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 TMOD4Q9NZQ9 345 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 SPEGQ15772 3267 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 COL1A1P02452 1464 aaPredicted RBP8.58□□□□□ -1.04
FGD6-205ENST00000549499 ZNF532Q9HCE3 1301 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 SSC5DA1L4H1 1573 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 SPTBN4Q9H254 2564 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 FGFR2P21802 821 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 COA7Q96BR5 231 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 VAT1LQ9HCJ6 419 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 SCN4AP35499 1836 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 DHX16O60231 1041 aaKnown RBP8.58□□□□□ -1.04
FGD6-205ENST00000549499 NMT2O60551 498 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 ANKRD45Q5TZF3 282 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 CLASRPQ8N2M8 674 aaKnown RBP8.58□□□□□ -1.04
FGD6-205ENST00000549499 KIFC2Q96AC6 838 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 NRXN2Q9P2S2 1712 aa8.58□□□□□ -1.04
FGD6-205ENST00000549499 SMCHD1A6NHR9 2005 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 CERKLQ49MI3 558 aaPredicted RBP8.57□□□□□ -1.04
FGD6-205ENST00000549499 FAM117BQ6P1L5 589 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 MTUS1Q9ULD2 1270 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 RABL6Q3YEC7 729 aaPredicted RBP8.57□□□□□ -1.04
FGD6-205ENST00000549499 ZNF280CQ8ND82 737 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 DNAJC18Q9H819 358 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 SRRDQ9UH36 339 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 RCAN3Q9UKA8 241 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 DICER1Q9UPY3 1922 aaKnown RBP8.57□□□□□ -1.04
FGD6-205ENST00000549499 PQBP1O60828 265 aaKnown RBP8.57□□□□□ -1.04
FGD6-205ENST00000549499 ALDH1A1P00352 501 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 RHBDL3P58872 404 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 SCYL3Q8IZE3 742 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 CCDC82Q8N4S0 544 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 AKAP2Q9Y2D5 859 aa8.57□□□□□ -1.04
FGD6-205ENST00000549499 CTDP1Q9Y5B0 961 aaPredicted RBP8.57□□□□□ -1.04
FGD6-205ENST00000549499 CHD9Q3L8U1 2897 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 KDM3BQ7LBC6 1761 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 IL16Q14005 1332 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 IBTKQ9P2D0 1353 aaPredicted RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 SOX1O00570 391 aaPredicted RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 BAG3O95817 575 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 ZBTB48P10074 688 aaPredicted RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 SLC16A2P36021 539 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 FKBP1BP68106 108 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 SP4Q02446 784 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 RHPN1Q8TCX5 695 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 MKNK2Q9HBH9 465 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 SLC4A4Q9Y6R1 1079 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 PTPRCP08575 1304 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 FAM205AQ6ZU69 1335 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 CACNA1HO95180 2353 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 CCDC174Q6PII3 467 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 PPP1R12CQ9BZL4 782 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 OSBPL5Q9H0X9 879 aaPredicted RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 FCGRTP55899 365 aa8.56□□□□□ -1.04
FGD6-205ENST00000549499 SKIV2LQ15477 1246 aaKnown RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 ZBED3Q96IU2 234 aaPredicted RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 ZHX1Q9UKY1 873 aaPredicted RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 NAP1L2Q9ULW6 460 aaPredicted RBP8.56□□□□□ -1.04
FGD6-205ENST00000549499 ZSWIM8A7E2V4 1837 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 AKAP11Q9UKA4 1901 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 MAGEB6P1A0A0J9YX57 407 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 A0A1W2PRG0 241 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
FGD6-205ENST00000549499 HLA-DOAP06340 250 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 TDO2P48775 406 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 PUS7LQ9H0K6 701 aaKnown RBP8.55□□□□□ -1.04
FGD6-205ENST00000549499 RPAP3Q9H6T3 665 aaPredicted RBP8.55□□□□□ -1.04
FGD6-205ENST00000549499 MROH7-TTC4A0A0A0MT08 1334 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 LAMB2P55268 1798 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 AKR1B1P15121 316 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 ABCB5Q2M3G0 1257 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 KIAA1755Q5JYT7 1200 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 TRIB2Q92519 343 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 ATG4CQ96DT6 458 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 CABP5Q9NP86 173 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 FLT1P17948 1338 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 PITPNM2Q9BZ72 1349 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 RANBP6O60518 1105 aaKnown RBP8.55□□□□□ -1.04
FGD6-205ENST00000549499 MAP3K12Q12852 859 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
FGD6-205ENST00000549499 PARK7Q99497 189 aaKnown RBP8.55□□□□□ -1.04
FGD6-205ENST00000549499 CLIP2Q9UDT6 1046 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 RAPGEFL1Q9UHV5 662 aa8.55□□□□□ -1.04
FGD6-205ENST00000549499 ARFGEF2Q9Y6D5 1785 aa8.54□□□□□ -1.04
FGD6-205ENST00000549499 BCORQ6W2J9 1755 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms