RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, human

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB2-215	ENST00000549220	CCIN	Q13939	588 aa		7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	TAF7	Q15545	349 aa	Predicted RBP	7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	FAM26D	Q5JW98	314 aa		7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	PNPLA7	Q6ZV29	1317 aa		7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	AMIGO3	Q86WK7	504 aa		7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	IFT43	Q96FT9	208 aa		7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	ZMYND15	Q9H091	742 aa		7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	TSPYL4	Q9UJ04	414 aa		7.65	□□□□□ -1.18
EFCAB2-215	ENST00000549220	CCDC88A	Q3V6T2	1871 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	HEG1	Q9ULI3	1381 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220		A0A0A0MRY4	1105 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	PRAMEF22	A3QJZ6	481 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	HTATSF1	O43719	755 aa	Known RBP	7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	MAP3K6	O95382	1288 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CRKL	P46109	303 aa	Known RBP	7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	IDH3A	P50213	366 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ADGRE1	Q14246	886 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	OCLN	Q16625	522 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	HIF1A	Q16665	826 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	COL23A1	Q86Y22	540 aa	Predicted RBP	7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	FMNL2	Q96PY5	1086 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	LPIN3	Q9BQK8	851 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ZMIZ1	Q9ULJ6	1067 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	RTCB	Q9Y3I0	505 aa	Known RBP	7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ARFGEF2	Q9Y6D5	1785 aa		7.64	□□□□□ -1.19
EFCAB2-215	ENST00000549220	NFKB1	P19838	968 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	DGKZ	Q13574	1117 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	NGEF	Q8N5V2	710 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SEMA6B	Q9H3T3	888 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SPON1	Q9HCB6	807 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	C11orf16	Q9NQ32	467 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CCDC87	Q9NVE4	849 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ZBTB1	Q9Y2K1	713 aa		7.63	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CHD4	Q14839	1912 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CNTNAP4	Q9C0A0	1308 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	LILRB5	O75023	590 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	A1BG	P04217	495 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	EIF2S2	P20042	333 aa	Known RBP	7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	TARS	P26639	723 aa	Known RBP	7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	RFC4	P35249	363 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	FKBP5	Q13451	457 aa	Predicted RBP	7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	KRT24	Q2M2I5	525 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	TRAPPC3L	Q5T215	181 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	NPM2	Q86SE8	214 aa	Known RBP	7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	TRPM4	Q8TD43	1214 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	UBE2O	Q9C0C9	1292 aa	Known RBP	7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SRP68	Q9UHB9	627 aa	Known RBP	7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	RBM19	Q9Y4C8	960 aa	Known RBP	7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ANKRD31	Q8N7Z5	1873 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	KIF13B	Q9NQT8	1826 aa		7.62	□□□□□ -1.19
EFCAB2-215	ENST00000549220	COL15A1	P39059	1388 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SPDYE3	A6NKU9	549 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ELL2	O00472	640 aa	Predicted RBP	7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	DYRK3	O43781	588 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	MICAL2	O94851	1124 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	STARD3NL	O95772	234 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	EGFR	P00533	1210 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SNRPA1	P09661	255 aa	Known RBP	7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CYP19A1	P11511	503 aa	Predicted RBP	7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SSFA2	P28290	1259 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	TRIM28	Q13263	835 aa	Known RBP	7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	MBTPS1	Q14703	1052 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	PRRT3	Q5FWE3	981 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	COX20	Q5RI15	118 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	PSAPL1	Q6NUJ1	521 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	INTS5	Q6P9B9	1019 aa	Known RBP	7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SHISA2	Q6UWI4	295 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	NUDT8	Q8WV74	236 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	TSR2	Q969E8	191 aa	Known RBP	7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	KRTAP4-8	Q9BYQ9	185 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	MTFR1L	Q9H019	292 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	USP16	Q9Y5T5	823 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SPEF2	Q9C093	1822 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	LAMB2	P55268	1798 aa		7.61	□□□□□ -1.19
EFCAB2-215	ENST00000549220	MYH3	P11055	1940 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	TAF1	P21675	1872 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	BRCA1	P38398	1863 aa	Known RBP	7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CCER2	I3L3R5	266 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	RPS6KA4	O75676	772 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	MYL6B	P14649	208 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	HMGB2	P26583	209 aa	Known RBP	7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	POLD1	P28340	1107 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	EIF4A1	P60842	406 aa	Known RBP	7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	C11orf91	Q3C1V1	193 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	PERM1	Q5SV97	790 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	FMR1NB	Q8N0W7	255 aa	Predicted RBP	7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	FLAD1	Q8NFF5	587 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	LENG1	Q96BZ8	264 aa	Predicted RBP	7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	USP20	Q9Y2K6	914 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	KCNMB2	Q9Y691	235 aa		7.6	□□□□□ -1.19
EFCAB2-215	ENST00000549220	SOS1	Q07889	1333 aa	Predicted RBP	7.59	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ANXA1	P04083	346 aa		7.59	□□□□□ -1.19
EFCAB2-215	ENST00000549220	ELN	P15502	786 aa		7.59	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CALD1	Q05682	793 aa	Known RBP	7.59	□□□□□ -1.19
EFCAB2-215	ENST00000549220	USPL1	Q5W0Q7	1092 aa		7.59	□□□□□ -1.19
EFCAB2-215	ENST00000549220	CAPN12	Q6ZSI9	719 aa		7.59	□□□□□ -1.19
EFCAB2-215	ENST00000549220	TTC9	Q92623	222 aa		7.59	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms