RNA–Protein interactions for RNA: ENST00000549101.1

USP15-211, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-211ENST00000549101 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
USP15-211ENST00000549101 NBPF11Q86T75 865 aa9.43□□□□□ -0.9
USP15-211ENST00000549101 RIN3Q8TB24 985 aa9.43□□□□□ -0.9
USP15-211ENST00000549101 XAGE3Q8WTP9 111 aa9.43□□□□□ -0.9
USP15-211ENST00000549101 TMEM87BQ96K49 555 aa9.43□□□□□ -0.9
USP15-211ENST00000549101 MIPEPQ99797 713 aa9.43□□□□□ -0.9
USP15-211ENST00000549101 ADAM30Q9UKF2 790 aa9.43□□□□□ -0.9
USP15-211ENST00000549101 PRR36Q9H6K5 1346 aa9.42□□□□□ -0.9
USP15-211ENST00000549101 SCAMP3O14828 347 aaKnown RBP9.42□□□□□ -0.9
USP15-211ENST00000549101 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
USP15-211ENST00000549101 OXCT1P55809 520 aa9.42□□□□□ -0.9
USP15-211ENST00000549101 XP32Q5T750 250 aa9.42□□□□□ -0.9
USP15-211ENST00000549101 DPH2Q9BQC3 489 aaPredicted RBP9.42□□□□□ -0.9
USP15-211ENST00000549101 BSDC1Q9NW68 430 aaPredicted RBP9.42□□□□□ -0.9
USP15-211ENST00000549101 WNT11O96014 354 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 CRKP46108 304 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 ZNF394Q53GI3 561 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 TMEM201Q5SNT2 666 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 USP48Q86UV5 1035 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 PLD6Q8N2A8 252 aaKnown RBP9.41□□□□□ -0.9
USP15-211ENST00000549101 LRRC3Q9BY71 257 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 MKNK2Q9HBH9 465 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 UBP1Q9NZI7 540 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 GTF2IRD1Q9UHL9 959 aa9.41□□□□□ -0.9
USP15-211ENST00000549101 CNTNAP4Q9C0A0 1308 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 UPK3BL1B0FP48 263 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 UPK3BL2E5RIL1 263 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
USP15-211ENST00000549101 LETMD1Q6P1Q0 360 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 NETO1Q8TDF5 533 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 SPON2Q9BUD6 331 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 BRMS1Q9HCU9 246 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 REV1Q9UBZ9 1251 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 CCDC39Q9UFE4 941 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 PCDHGB7Q9Y5F8 929 aa9.4□□□□□ -0.9
USP15-211ENST00000549101 IGF2BP3O00425 579 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP15-211ENST00000549101 HTR3BO95264 441 aa9.39□□□□□ -0.91
USP15-211ENST00000549101 PRNPP04156 253 aa9.39□□□□□ -0.91
USP15-211ENST00000549101 RACK1P63244 317 aaKnown RBP9.39□□□□□ -0.91
USP15-211ENST00000549101 ARHGAP27Q6ZUM4 889 aa9.39□□□□□ -0.91
USP15-211ENST00000549101 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
USP15-211ENST00000549101 TPX2Q9ULW0 747 aaKnown RBP9.39□□□□□ -0.91
USP15-211ENST00000549101 PLAGL2Q9UPG8 496 aa9.39□□□□□ -0.91
USP15-211ENST00000549101 METTL16Q86W50 562 aaKnown RBP9.38□□□□□ -0.91
USP15-211ENST00000549101 KIAA0825Q8IV33 1275 aa9.38□□□□□ -0.91
USP15-211ENST00000549101 NT5C1AQ9BXI3 368 aa9.38□□□□□ -0.91
USP15-211ENST00000549101 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
USP15-211ENST00000549101 CEACAM5P06731 702 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 ITIH2P19823 946 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 APOBRQ0VD83 1088 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 CDH24Q86UP0 819 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 FAM13CQ8NE31 585 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 ZNF428Q96B54 188 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 DDX41Q9UJV9 622 aaKnown RBP9.37□□□□□ -0.91
USP15-211ENST00000549101 PCDHB14Q9Y5E9 798 aa9.37□□□□□ -0.91
USP15-211ENST00000549101 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
USP15-211ENST00000549101 RBAK-RBAKDNI3L0D1 243 aa9.36□□□□□ -0.91
USP15-211ENST00000549101 IFI16Q16666 785 aaKnown RBP9.36□□□□□ -0.91
USP15-211ENST00000549101 C9orf131Q5VYM1 1079 aa9.36□□□□□ -0.91
USP15-211ENST00000549101 NFXL1Q6ZNB6 911 aa9.36□□□□□ -0.91
USP15-211ENST00000549101 ANGEL1Q9UNK9 670 aaKnown RBP9.36□□□□□ -0.91
USP15-211ENST00000549101 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
USP15-211ENST00000549101 DNAJA2O60884 412 aa9.35□□□□□ -0.91
USP15-211ENST00000549101 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
USP15-211ENST00000549101 GP2P55259 537 aaKnown RBP9.35□□□□□ -0.91
USP15-211ENST00000549101 HDLBPQ00341 1268 aaKnown RBP9.35□□□□□ -0.91
USP15-211ENST00000549101 BNIP3Q12983 259 aa9.35□□□□□ -0.91
USP15-211ENST00000549101 SFRP5Q5T4F7 317 aa9.35□□□□□ -0.91
USP15-211ENST00000549101 VSIG10LQ86VR7 867 aa9.35□□□□□ -0.91
USP15-211ENST00000549101 BCL7CQ8WUZ0 217 aaPredicted RBP9.35□□□□□ -0.91
USP15-211ENST00000549101 NKD1Q969G9 470 aa9.35□□□□□ -0.91
USP15-211ENST00000549101 KLHL3Q9UH77 587 aa9.35□□□□□ -0.91
USP15-211ENST00000549101 GNAT3A8MTJ3 354 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 PRR33A8MZF0 331 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 ATE1O95260 518 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 MCM4P33991 863 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 NKPD1Q17RQ9 610 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 SLITRK4Q8IW52 837 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 SLFN12Q8IYM2 578 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 PPP1R13LQ8WUF5 828 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 TNKS2Q9H2K2 1166 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 SLC5A6Q9Y289 635 aa9.34□□□□□ -0.91
USP15-211ENST00000549101 OAS3Q9Y6K5 1087 aaKnown RBP9.34□□□□□ -0.91
USP15-211ENST00000549101 TMEM265A0A087WTH1 108 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 CLCQ05315 142 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 ZNF746Q6NUN9 644 aaPredicted RBP9.33□□□□□ -0.92
USP15-211ENST00000549101 GK5Q6ZS86 529 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 SPACA3Q8IXA5 215 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 REXO1Q8N1G1 1221 aaKnown RBP9.33□□□□□ -0.92
USP15-211ENST00000549101 DNAJB8Q8NHS0 232 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 CYB5D2Q8WUJ1 264 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 MISP3Q96FF7 219 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 EHMT1Q9H9B1 1298 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 VAV3Q9UKW4 847 aa9.33□□□□□ -0.92
USP15-211ENST00000549101 SLC22A31A6NKX4 558 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms