RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 DTHD1Q6ZMT9 781 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 HS2ST1Q7LGA3 356 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 TMEM102Q8N9M5 508 aaPredicted RBP3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 KLHL23Q8NBE8 558 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 NXPE3Q969Y0 559 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 SPACA7Q96KW9 195 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 POP1Q99575 1024 aaKnown RBP3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 PBX4Q9BYU1 374 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 BHLHE41Q9C0J9 482 aaPredicted RBP3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 ACBD3Q9H3P7 528 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 COPRSQ9NQ92 184 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 SH2B1Q9NRF2 756 aaPredicted RBP3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 GGT7Q9UJ14 662 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 TTF2Q9UNY4 1162 aaKnown RBP3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 AKAP2Q9Y2D5 859 aa3.4□□□□□ -1.87
DEPDC4-206ENST00000549100 CASKIN1Q8WXD9 1431 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 PDS5BQ9NTI5 1447 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 A0A096LPE4 126 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 A0A1W2PPZ6 126 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 PDE2AO00408 941 aaPredicted RBP3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 CELA3AP09093 270 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 BMP7P18075 431 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 EPHA1P21709 976 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ITPKAP23677 461 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 FAAP100Q0VG06 881 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 DDX10Q13206 875 aaKnown RBP3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ZXDCQ2QGD7 858 aaPredicted RBP3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 CEP135Q66GS9 1140 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 CIAPIN1Q6FI81 312 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 TPTE2Q6XPS3 522 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ERMP1Q7Z2K6 904 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 USP48Q86UV5 1035 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 FLAD1Q8NFF5 587 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ASAP3Q8TDY4 903 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 TINF2Q9BSI4 451 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 RUSC1Q9BVN2 902 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 TGIF2Q9GZN2 237 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ZNF576Q9H609 170 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 PRDM7Q9NQW5 492 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 DDX41Q9UJV9 622 aaKnown RBP3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 GAPVD1Q14C86 1478 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ZNF644Q9H582 1327 aaPredicted RBP3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ARHGEF11O15085 1522 aa3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 CDK13Q14004 1512 aaKnown RBP3.39□□□□□ -1.87
DEPDC4-206ENST00000549100 ENC1O14682 589 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 PAGE1O75459 146 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 ADRB1P08588 477 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 XRCC5P13010 732 aaKnown RBP3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 CDC27P30260 824 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 NLRP12P59046 1061 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 NFIXQ14938 502 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 CCDC85BQ15834 202 aaPredicted RBP3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 DUSP27Q5VZP5 1158 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 ATG14Q6ZNE5 492 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 STK11IPQ8N1F8 1099 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 PLD6Q8N2A8 252 aaKnown RBP3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 ANKRD24Q8TF21 1146 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 NOC4LQ9BVI4 516 aaKnown RBP3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 ZCCHC4Q9H5U6 513 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 CCSER2Q9H7U1 834 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 RRP7BPQ9NSQ0 103 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 KBTBD4Q9NVX7 518 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 PPP4R2Q9NY27 417 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 USP35Q9P2H5 1018 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 PPM1HQ9ULR3 514 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 PBRM1Q86U86 1689 aa3.38□□□□□ -1.87
DEPDC4-206ENST00000549100 PTPN23Q9H3S7 1636 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 CUL7Q14999 1698 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 NCOA2Q15596 1464 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 SMNDC1O75940 238 aaKnown RBP eCLIP3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 TIAF1O95411 115 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 ZNF157P51786 506 aaPredicted RBP3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 MAP3K11Q16584 847 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 NBPF8Q3BBV2 869 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 HGSNATQ68CP4 663 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 VN1R5Q7Z5H4 357 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 CACTIN-AS1Q8N1I8 211 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 C12orf50Q8NA57 414 aaPredicted RBP3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 BSNDQ8WZ55 320 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 NECAB3Q96P71 396 aaPredicted RBP3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 IRF2BPLQ9H1B7 796 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 RBSNQ9H1K0 784 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 CAPN10Q9HC96 672 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 SEC31BQ9NQW1 1179 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 SOX13Q9UN79 622 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 TLR6Q9Y2C9 796 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 U3KQE9 123 aa3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 THOC2Q8NI27 1593 aaKnown RBP3.37□□□□□ -1.87
DEPDC4-206ENST00000549100 NAIPQ13075 1403 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 FGD6Q6ZV73 1430 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 FYCO1Q9BQS8 1478 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 DISP1Q96F81 1524 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 UGGT2Q9NYU1 1516 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 DLGAP3O95886 979 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 INSRRP14616 1297 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 PTPRAP18433 802 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 PUM1Q14671 1186 aaKnown RBP eCLIP3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 ZNF423Q2M1K9 1284 aa3.36□□□□□ -1.87
DEPDC4-206ENST00000549100 RASIP1Q5U651 963 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms