RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZNF521Q96K83 1311 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 TBC1D12O60347 775 aa10.49□□□□□ -0.73
TROAP-208ENST00000548817 CIAO1O76071 339 aa10.49□□□□□ -0.73
TROAP-208ENST00000548817 IL15P40933 162 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 RFX5P48382 616 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 RGS3P49796 1198 aa10.49□□□□□ -0.73
TROAP-208ENST00000548817 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
TROAP-208ENST00000548817 DIXDC1Q155Q3 683 aa10.49□□□□□ -0.73
TROAP-208ENST00000548817 MORN1Q5T089 497 aa10.49□□□□□ -0.73
TROAP-208ENST00000548817 SPTY2D1Q68D10 685 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 SLC39A5Q6ZMH5 540 aa10.49□□□□□ -0.73
TROAP-208ENST00000548817 ZSCAN29Q8IWY8 852 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 CCAR1Q8IX12 1150 aaKnown RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 API5Q9BZZ5 524 aaKnown RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 OSBPL5Q9H0X9 879 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 PRDM5Q9NQX1 630 aaPredicted RBP10.49□□□□□ -0.73
TROAP-208ENST00000548817 CACNA1AO00555 2505 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 GLRX3O76003 335 aaKnown RBP10.48□□□□□ -0.73
TROAP-208ENST00000548817 HOXA7P31268 230 aaPredicted RBP10.48□□□□□ -0.73
TROAP-208ENST00000548817 HMGCS2P54868 508 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 SPP2Q13103 211 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 CCL14Q16627 93 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 AAK1Q2M2I8 961 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 TMEM31Q5JXX7 168 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 ATG9AQ7Z3C6 839 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 PLEKHH3Q7Z736 793 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 DZIP1Q86YF9 867 aaKnown RBP10.48□□□□□ -0.73
TROAP-208ENST00000548817 ZFPM1Q8IX07 1006 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 TIFAQ96CG3 184 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 CXXC1Q9P0U4 656 aaPredicted RBP10.48□□□□□ -0.73
TROAP-208ENST00000548817 TACC3Q9Y6A5 838 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 CHD9Q3L8U1 2897 aa10.48□□□□□ -0.73
TROAP-208ENST00000548817 KBTBD13C9JR72 458 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 CT47B1P0C2W7 299 aaPredicted RBP10.47□□□□□ -0.73
TROAP-208ENST00000548817 PRDX5P30044 214 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 HERVK_113P62684 666 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 MAP2K5Q13163 448 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 SH3BP5LQ7L8J4 393 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 GPR142Q7Z601 462 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 AS3MTQ9HBK9 375 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 ABCF2Q9UG63 623 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 NOB1Q9ULX3 412 aaKnown RBP10.47□□□□□ -0.73
TROAP-208ENST00000548817 AKAP2Q9Y2D5 859 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 SALL1Q9NSC2 1324 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 ATAD5Q96QE3 1844 aa10.47□□□□□ -0.73
TROAP-208ENST00000548817 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
TROAP-208ENST00000548817 HOXC6P09630 235 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 BMP1P13497 986 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 PHKA1P46020 1223 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 ERVK-9P63128 1117 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 ERVK-24P63145 666 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 TRIM60Q495X7 471 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 GORABQ5T7V8 394 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 CCDC84Q86UT8 332 aaPredicted RBP10.46□□□□□ -0.73
TROAP-208ENST00000548817 EDC3Q96F86 508 aaKnown RBP10.46□□□□□ -0.73
TROAP-208ENST00000548817 GAKO14976 1311 aa10.46□□□□□ -0.73
TROAP-208ENST00000548817 MYH2Q9UKX2 1941 aa10.46□□□□□ -0.74
TROAP-208ENST00000548817 MYO9BQ13459 2157 aa10.46□□□□□ -0.74
TROAP-208ENST00000548817 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 DDTLA6NHG4 134 aaPredicted RBP10.45□□□□□ -0.74
TROAP-208ENST00000548817 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 KIAA0355O15063 1070 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 ZBTB22O15209 634 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 GPR37L1O60883 481 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 LDHCP07864 332 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 GNAI3P08754 354 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 FPGSQ05932 587 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 CCDC102BQ68D86 513 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 ERICH6Q7L0X2 663 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 ALYREFQ86V81 257 aaKnown RBP10.45□□□□□ -0.74
TROAP-208ENST00000548817 PPM1EQ8WY54 764 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
TROAP-208ENST00000548817 NEUROD6Q96NK8 337 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 P2RX7Q99572 595 aaKnown RBP10.45□□□□□ -0.74
TROAP-208ENST00000548817 WDR18Q9BV38 432 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 PORCNQ9H237 461 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 TXNRD2Q9NNW7 524 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 COPRSQ9NQ92 184 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 TMOD4Q9NZQ9 345 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.45□□□□□ -0.74
TROAP-208ENST00000548817 RBPJLQ9UBG7 517 aa10.45□□□□□ -0.74
TROAP-208ENST00000548817 PA2G4Q9UQ80 394 aaKnown RBP10.45□□□□□ -0.74
TROAP-208ENST00000548817 SLC15A5A6NIM6 579 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 CLTBP09497 229 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 CNGA1P29973 690 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 CAP2P40123 477 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 EPHB4P54760 987 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 TIMM10P62072 90 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 CCNA1P78396 465 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 GSTO1P78417 241 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 PICALMQ13492 652 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
TROAP-208ENST00000548817 CCDC174Q6PII3 467 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 SH3RF1Q7Z6J0 888 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 CDCA7LQ96GN5 454 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 PRDM12Q9H4Q4 367 aa10.44□□□□□ -0.74
TROAP-208ENST00000548817 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms