RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 GABPAQ06546 454 aa19.54■□□□□ 0.72
RAPGEF3-217ENST00000548434 MORF4L1Q9UBU8 362 aa19.54■□□□□ 0.72
RAPGEF3-217ENST00000548434 ZBTB21Q9ULJ3 1066 aa19.54■□□□□ 0.72
RAPGEF3-217ENST00000548434 RAB11FIP3O75154 756 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 MYCP01106 439 aaPredicted RBP19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 GJB1P08034 283 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 PLCD1P51178 756 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 EVX2Q03828 476 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 MAP3K12Q12852 859 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 PDE3AQ14432 1141 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 SLC4A8Q2Y0W8 1093 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 CERS3Q8IU89 383 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 RAET1EQ8TD07 263 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 PXYLP1Q8TE99 480 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 EMILIN3Q9NT22 766 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 MYH7P12883 1935 aa19.53■□□□□ 0.72
RAPGEF3-217ENST00000548434 GDF11O95390 407 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 CCL5P13501 91 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 PDE6AP16499 860 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 GUCY1A2P33402 732 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 GJA8P48165 433 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 GCLCP48506 637 aaPredicted RBP19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 MTMR2Q13614 643 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 SLAIN1Q8ND83 568 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 EDC3Q96F86 508 aaKnown RBP19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 P2RX7Q99572 595 aaKnown RBP19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 AS3MTQ9HBK9 375 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 PNMA3Q9UL41 463 aa19.52■□□□□ 0.72
RAPGEF3-217ENST00000548434 NAV1Q8NEY1 1877 aa19.52■□□□□ 0.71
RAPGEF3-217ENST00000548434 RLFQ13129 1914 aa19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 C19orf81C9J6K1 198 aa19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 USP17L10C9JJH3 530 aa19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 ADCY3O60266 1144 aa19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 PEX10O60683 326 aa19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 SHMT1P34896 483 aa19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 CLASRPQ8N2M8 674 aaKnown RBP19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 SMCR8Q8TEV9 937 aaPredicted RBP19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 TXNRD2Q9NNW7 524 aa19.51■□□□□ 0.71
RAPGEF3-217ENST00000548434 ELNP15502 786 aa19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 ATP5JP18859 108 aa19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 SLFNL1Q499Z3 407 aa19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 C12orf42Q96LP6 360 aa19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 UNC93B1Q9H1C4 597 aa19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 RBPJLQ9UBG7 517 aa19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 SERPINB13Q9UIV8 391 aa19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 BAZ2AQ9UIF9 1905 aaKnown RBP19.5■□□□□ 0.71
RAPGEF3-217ENST00000548434 HMMRO75330 724 aa19.49■□□□□ 0.71
RAPGEF3-217ENST00000548434 GH2P01242 217 aa19.49■□□□□ 0.71
RAPGEF3-217ENST00000548434 CHGBP05060 677 aa19.49■□□□□ 0.71
RAPGEF3-217ENST00000548434 SLC9C2Q5TAH2 1124 aa19.49■□□□□ 0.71
RAPGEF3-217ENST00000548434 CRACR2BQ8N4Y2 399 aaPredicted RBP19.49■□□□□ 0.71
RAPGEF3-217ENST00000548434 ZNF532Q9HCE3 1301 aa19.49■□□□□ 0.71
RAPGEF3-217ENST00000548434 APBB1O00213 710 aa19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 GOLIM4O00461 696 aa19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 TNPO2O14787 897 aaKnown RBP19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 HLA-DOAP06340 250 aa19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 PABPC4Q13310 644 aaKnown RBP eCLIP19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 Q3C1V9 767 aa19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 USP6NLQ92738 828 aa19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 PAK6Q9NQU5 681 aaPredicted RBP19.48■□□□□ 0.71
RAPGEF3-217ENST00000548434 ALPK3Q96L96 1907 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 MAGEB6P1A0A0J9YX57 407 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 ADD2P35612 726 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 USP5P45974 858 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 HERVK_113P62684 666 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 LCORLQ8N3X6 602 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 HAUS7Q99871 368 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 CRISPLD2Q9H0B8 497 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 RNF208Q9H0X6 261 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 DCP1AQ9NPI6 582 aaPredicted RBP19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 SZT2Q5T011 3432 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 DNAH12Q6ZR08 3092 aa19.47■□□□□ 0.71
RAPGEF3-217ENST00000548434 SMIM22K7EJ46 135 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 CNMDO75829 334 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 SGPL1O95470 568 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 INHAP05111 366 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 IFIT2P09913 472 aaKnown RBP19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 TTC6Q86TZ1 520 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 ACER1Q8TDN7 264 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 BOLA2Q9H3K6 86 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 TRIOBPQ9H2D6 2365 aa19.46■□□□□ 0.71
RAPGEF3-217ENST00000548434 UBXN2AP68543 259 aa19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 CERKLQ49MI3 558 aaPredicted RBP19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 USP17L2Q6R6M4 530 aa19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 SIAH1Q8IUQ4 282 aa19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 NKX2-3Q8TAU0 364 aa19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 U2AF1L4Q8WU68 220 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 COA7Q96BR5 231 aa19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 PAG1Q9NWQ8 432 aa19.45■□□□□ 0.7
RAPGEF3-217ENST00000548434 A0A1W2PRG0 241 aa19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 HABP4Q5JVS0 413 aaKnown RBP19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 SDR42E1Q8WUS8 393 aa19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 DNAJC2Q99543 621 aaKnown RBP19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 TMOD4Q9NZQ9 345 aa19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 MYH8P13535 1937 aa19.44■□□□□ 0.7
RAPGEF3-217ENST00000548434 PRKAB2O43741 272 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms