RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 HCLS1P14317 486 aaPredicted RBP6.27□□□□□ -1.41
PTCH1-216ENST00000548379 ASPAP45381 313 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 NKG7Q16617 165 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 UVSSAQ2YD98 709 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.27□□□□□ -1.41
PTCH1-216ENST00000548379 DYMQ7RTS9 669 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 NOP9Q86U38 636 aaKnown RBP6.27□□□□□ -1.41
PTCH1-216ENST00000548379 EZH1Q92800 747 aaPredicted RBP6.27□□□□□ -1.41
PTCH1-216ENST00000548379 PIF1Q9H611 641 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 ACTR10Q9NZ32 417 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 USP21Q9UK80 565 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 UPK3BL1B0FP48 263 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 UPK3BL2E5RIL1 263 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 CST3P01034 146 aaPredicted RBP6.26□□□□□ -1.41
PTCH1-216ENST00000548379 CCNFP41002 786 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 ARSHQ5FYA8 562 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 LRP10Q7Z4F1 713 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 TTC6Q86TZ1 520 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 SMYD4Q8IYR2 804 aaPredicted RBP6.26□□□□□ -1.41
PTCH1-216ENST00000548379 CELF2-AS1Q8N7Q2 184 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 SLC9A7Q96T83 725 aa6.26□□□□□ -1.41
PTCH1-216ENST00000548379 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
PTCH1-216ENST00000548379 IREB2P48200 963 aaKnown RBP6.25□□□□□ -1.41
PTCH1-216ENST00000548379 YARSP54577 528 aaKnown RBP6.25□□□□□ -1.41
PTCH1-216ENST00000548379 ZYXQ15942 572 aaKnown RBP6.25□□□□□ -1.41
PTCH1-216ENST00000548379 CDPF1Q6NVV7 123 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 GIMAP6Q6P9H5 292 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 SEZ6L2Q6UXD5 910 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 TXNRD3Q86VQ6 643 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 ARMC10Q8N2F6 343 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 FAM13CQ8NE31 585 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 MEGF10Q96KG7 1140 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 PSMG3-AS1Q96PY0 264 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 ZSWIM4Q9H7M6 989 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 PICK1Q9NRD5 415 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 KLHL3Q9UH77 587 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 PCOLCE2Q9UKZ9 415 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 CDK11AQ9UQ88 783 aaPredicted RBP6.25□□□□□ -1.41
PTCH1-216ENST00000548379 LTBP3Q9NS15 1303 aa6.25□□□□□ -1.41
PTCH1-216ENST00000548379 KRBA1A5PL33 1030 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 K7ELQ4 463 aaPredicted RBP6.24□□□□□ -1.41
PTCH1-216ENST00000548379 RGS13O14921 159 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 GLB1P16278 677 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 RASA3Q14644 834 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 NFE2L2Q16236 605 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 DDR2Q16832 855 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 CDC37L1Q7L3B6 337 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 MICAL1Q8TDZ2 1067 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 MYRFLQ96LU7 910 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 TRIM55Q9BYV6 548 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 FOXQ1Q9C009 403 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 CCDC113Q9H0I3 377 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 SEMA6CQ9H3T2 930 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 SLC12A7Q9Y666 1083 aa6.24□□□□□ -1.41
PTCH1-216ENST00000548379 COL17A1Q9UMD9 1497 aaPredicted RBP6.23□□□□□ -1.41
PTCH1-216ENST00000548379 LRIG2O94898 1065 aa6.23□□□□□ -1.41
PTCH1-216ENST00000548379 UBOX5O94941 541 aa6.23□□□□□ -1.41
PTCH1-216ENST00000548379 ZNF746Q6NUN9 644 aaPredicted RBP6.23□□□□□ -1.41
PTCH1-216ENST00000548379 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTCH1-216ENST00000548379 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
PTCH1-216ENST00000548379 CYB5D2Q8WUJ1 264 aa6.23□□□□□ -1.41
PTCH1-216ENST00000548379 R3HCC1Q9Y3T6 440 aaKnown RBP6.23□□□□□ -1.41
PTCH1-216ENST00000548379 CADPSQ9ULU8 1353 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 FAM181BA6NEQ2 426 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 SART1O43290 800 aaKnown RBP6.22□□□□□ -1.41
PTCH1-216ENST00000548379 RNGTTO60942 597 aaKnown RBP6.22□□□□□ -1.41
PTCH1-216ENST00000548379 RAG1P15918 1043 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 POLR2BP30876 1174 aaKnown RBP6.22□□□□□ -1.41
PTCH1-216ENST00000548379 CHRNA4P43681 627 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 GSK3AP49840 483 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 FXNQ16595 210 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 SGO2Q562F6 1265 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 CD163Q86VB7 1156 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 FAM20CQ8IXL6 584 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 MFSD2AQ8NA29 543 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 FBLIM1Q8WUP2 373 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 DCAF5Q96JK2 942 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 CCDC74BQ96LY2 380 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 PHAXQ9H814 394 aaKnown RBP6.22□□□□□ -1.41
PTCH1-216ENST00000548379 SNTG2Q9NY99 539 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 ZNF214Q9UL59 606 aaPredicted RBP6.22□□□□□ -1.41
PTCH1-216ENST00000548379 TBX22Q9Y458 520 aa6.22□□□□□ -1.41
PTCH1-216ENST00000548379 FAM221BA6H8Z2 402 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 RNF225M0QZC1 329 aaPredicted RBP6.21□□□□□ -1.42
PTCH1-216ENST00000548379 U2SURPO15042 1029 aaKnown RBP6.21□□□□□ -1.42
PTCH1-216ENST00000548379 DYNC1LI2O43237 492 aaPredicted RBP6.21□□□□□ -1.42
PTCH1-216ENST00000548379 GAS2O43903 313 aaKnown RBP6.21□□□□□ -1.42
PTCH1-216ENST00000548379 GJB6O95452 261 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 NFICP08651 508 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 USP11P51784 963 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 BMS1Q14692 1282 aaKnown RBP6.21□□□□□ -1.42
PTCH1-216ENST00000548379 PPP2R5EQ16537 467 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 TMEM192Q8IY95 271 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 DNAJB8Q8NHS0 232 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 BAHD1Q8TBE0 780 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms