RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 RAD51AP2Q09MP3 1159 aa6.84□□□□□ -1.31
DEPDC4-205ENST00000548313 APOBRQ0VD83 1088 aa6.84□□□□□ -1.31
DEPDC4-205ENST00000548313 OGFOD2Q6N063 350 aa6.84□□□□□ -1.31
DEPDC4-205ENST00000548313 SEZ6L2Q6UXD5 910 aa6.84□□□□□ -1.31
DEPDC4-205ENST00000548313 SLITRK4Q8IW52 837 aa6.84□□□□□ -1.31
DEPDC4-205ENST00000548313 ADAM30Q9UKF2 790 aa6.84□□□□□ -1.31
DEPDC4-205ENST00000548313 LEMD3Q9Y2U8 911 aa6.84□□□□□ -1.31
DEPDC4-205ENST00000548313 HOXA10P31260 410 aaPredicted RBP6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 CPSF6Q16630 551 aaKnown RBP eCLIP6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 HID1Q8IV36 788 aa6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 REXO1Q8N1G1 1221 aaKnown RBP6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 NKD1Q969G9 470 aa6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 EAF1Q96JC9 268 aaPredicted RBP6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 CCSER2Q9H7U1 834 aa6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 PRKAG2Q9UGJ0 569 aa6.83□□□□□ -1.32
DEPDC4-205ENST00000548313 GRK4P32298 578 aa6.82□□□□□ -1.32
DEPDC4-205ENST00000548313 COL9A2Q14055 689 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-205ENST00000548313 NPM2Q86SE8 214 aaKnown RBP6.82□□□□□ -1.32
DEPDC4-205ENST00000548313 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
DEPDC4-205ENST00000548313 FBXL18Q96ME1 805 aa6.82□□□□□ -1.32
DEPDC4-205ENST00000548313 C1GALT1Q9NS00 363 aa6.82□□□□□ -1.32
DEPDC4-205ENST00000548313 UBP1Q9NZI7 540 aa6.82□□□□□ -1.32
DEPDC4-205ENST00000548313 TLR3O15455 904 aaKnown RBP6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 ATE1O95260 518 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 PGRP06401 933 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 FOSL1P15407 271 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 CRKP46108 304 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 ZNF165P49910 485 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 CYP27A1Q02318 531 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 PAK2Q13177 524 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 MLECQ14165 292 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 SEZ6Q53EL9 994 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 TMEM201Q5SNT2 666 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 POU5F2Q8N7G0 328 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 RASGRP4Q8TDF6 673 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 BRMS1Q9HCU9 246 aa6.81□□□□□ -1.32
DEPDC4-205ENST00000548313 DYNC1LI2O43237 492 aaPredicted RBP6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 LRIG2O94898 1065 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 PRNPP04156 253 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 C8AP07357 584 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 PLCG1P19174 1290 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 GJA8P48165 433 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 SLC6A19Q695T7 634 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 CBLL1Q75N03 491 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 ZAR1Q86SH2 424 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 MCATQ8IVS2 390 aaKnown RBP6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 MRPL41Q8IXM3 137 aaKnown RBP6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 GPRASP2Q96D09 838 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 TBC1D32Q96NH3 1257 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 OSBPL1AQ9BXW6 950 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 FOXQ1Q9C009 403 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 EHMT1Q9H9B1 1298 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 CCDC39Q9UFE4 941 aa6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 POLR3KQ9Y2Y1 108 aaPredicted RBP6.8□□□□□ -1.32
DEPDC4-205ENST00000548313 HTR3BO95264 441 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 JUNBP17275 347 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 GNL2Q13823 731 aaKnown RBP6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 SLBPQ14493 270 aaKnown RBP eCLIP6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 MSMPQ1L6U9 139 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 OGFOD3Q6PK18 319 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 VSIG10LQ86VR7 867 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 MFSD2AQ8NA29 543 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 GATA6Q92908 595 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 METTL22Q9BUU2 404 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 ACBD3Q9H3P7 528 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 LGR6Q9HBX8 967 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 INPP5FQ9Y2H2 1132 aa6.79□□□□□ -1.32
DEPDC4-205ENST00000548313 GRIN3BO60391 1043 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 CST3P01034 146 aaPredicted RBP6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 IMPDH2P12268 514 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 MCM4P33991 863 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 YARSP54577 528 aaKnown RBP6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 CYP27C1Q4G0S4 372 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 DUSP27Q5VZP5 1158 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 TP53INP2Q8IXH6 220 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 FBXL6Q8N531 539 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 ACSF2Q96CM8 615 aaPredicted RBP6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 TMEM87BQ96K49 555 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 FBRSQ9HAH7 460 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 REV1Q9UBZ9 1251 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 TJP2Q9UDY2 1190 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 PCDHB14Q9Y5E9 798 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 CORINQ9Y5Q5 1042 aa6.78□□□□□ -1.32
DEPDC4-205ENST00000548313 F13BP05160 661 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 ADMP35318 185 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 NKG7Q16617 165 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 UBE3DQ7Z6J8 389 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 VPS37DQ86XT2 251 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 SLFN12Q8IYM2 578 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 SEC16BQ96JE7 1060 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 PRDM10Q9NQV6 1147 aa6.77□□□□□ -1.33
DEPDC4-205ENST00000548313 ITGB5P18084 799 aa6.76□□□□□ -1.33
DEPDC4-205ENST00000548313 SOX9P48436 509 aa6.76□□□□□ -1.33
DEPDC4-205ENST00000548313 CDK5R2Q13319 367 aa6.76□□□□□ -1.33
DEPDC4-205ENST00000548313 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
DEPDC4-205ENST00000548313 AGBL5Q8NDL9 886 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms