RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 PHF20L1A8MW92 1017 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 HIP1O00291 1037 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 RNF113AO15541 343 aaKnown RBP14.49□□□□□ -0.09
HDAC7-226ENST00000547259 TBC1D12O60347 775 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 CDC45O75419 566 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 ZFYP08048 801 aaPredicted RBP14.49□□□□□ -0.09
HDAC7-226ENST00000547259 CCL5P13501 91 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 PTPRAP18433 802 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 FXR1P51114 621 aaKnown RBP eCLIP14.49□□□□□ -0.09
HDAC7-226ENST00000547259 MOGSQ13724 837 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 GPAT2Q6NUI2 795 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 PXYLP1Q8TE99 480 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 SMCR8Q8TEV9 937 aaPredicted RBP14.49□□□□□ -0.09
HDAC7-226ENST00000547259 AFG3L2Q9Y4W6 797 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 ZSWIM8A7E2V4 1837 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 H0YGN5 161 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 CYP7A1P22680 504 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 ADD2P35612 726 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 PABPC4Q13310 644 aaKnown RBP eCLIP14.48□□□□□ -0.09
HDAC7-226ENST00000547259 IRF5Q13568 498 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 MTFR1Q15390 333 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 CASC1Q6TDU7 716 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 GADL1Q6ZQY3 521 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 TICAM2Q86XR7 235 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 COA7Q96BR5 231 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 PTPRFP10586 1907 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 DOCK1Q14185 1865 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
HDAC7-226ENST00000547259 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 MROH7-TTC4A0A0A0MT08 1334 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 NAV1Q8NEY1 1877 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 GPR75-ASB3A0A0A6YYF3 556 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 ADCY3O60266 1144 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 CHGBP05060 677 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 CYP2C8P10632 490 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 CTGFP29279 349 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 NMIQ13287 307 aaPredicted RBP14.47□□□□□ -0.09
HDAC7-226ENST00000547259 UBE3CQ15386 1083 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 TMED8Q6PL24 325 aaPredicted RBP14.47□□□□□ -0.09
HDAC7-226ENST00000547259 ZFPM1Q8IX07 1006 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 APPBP2Q92624 585 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 NOL10Q9BSC4 688 aaKnown RBP14.47□□□□□ -0.09
HDAC7-226ENST00000547259 DOCK3Q8IZD9 2030 aa14.47□□□□□ -0.09
HDAC7-226ENST00000547259 TCRBV5S4A2TA0A5A2 114 aa14.46□□□□□ -0.09
HDAC7-226ENST00000547259 TNPO2O14787 897 aaKnown RBP14.46□□□□□ -0.09
HDAC7-226ENST00000547259 ECM2O94769 699 aaPredicted RBP14.46□□□□□ -0.09
HDAC7-226ENST00000547259 CHMLP26374 656 aa14.46□□□□□ -0.09
HDAC7-226ENST00000547259 BTDP43251 543 aa14.46□□□□□ -0.09
HDAC7-226ENST00000547259 GCLCP48506 637 aaPredicted RBP14.46□□□□□ -0.09
HDAC7-226ENST00000547259 PRKCZQ05513 592 aa14.46□□□□□ -0.09
HDAC7-226ENST00000547259 SLFNL1Q499Z3 407 aa14.46□□□□□ -0.09
HDAC7-226ENST00000547259 PROCA1Q8NCQ7 364 aaPredicted RBP14.46□□□□□ -0.09
HDAC7-226ENST00000547259 ZNF384Q8TF68 577 aa14.46□□□□□ -0.09
HDAC7-226ENST00000547259 OSBPL5Q9H0X9 879 aaPredicted RBP14.46□□□□□ -0.09
HDAC7-226ENST00000547259 AGTPBP1Q9UPW5 1226 aa14.46□□□□□ -0.09
HDAC7-226ENST00000547259 A0A0D9SFI3 127 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 SGPL1O95470 568 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 FLT3LGP49771 235 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 PICALMQ13492 652 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 CWC27Q6UX04 472 aaKnown RBP14.45□□□□□ -0.1
HDAC7-226ENST00000547259 ADGRA1Q86SQ6 560 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 U2AF1L4Q8WU68 220 aaKnown RBP14.45□□□□□ -0.1
HDAC7-226ENST00000547259 RUFY2Q8WXA3 655 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 FAM227BQ96M60 508 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC7-226ENST00000547259 PHIPQ8WWQ0 1821 aa14.45□□□□□ -0.1
HDAC7-226ENST00000547259 RANBP2P49792 3224 aaKnown RBP14.45□□□□□ -0.1
HDAC7-226ENST00000547259 RAD50Q92878 1312 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 MAGEB6P1A0A0J9YX57 407 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 DDTLA6NHG4 134 aaPredicted RBP14.44□□□□□ -0.1
HDAC7-226ENST00000547259 TRIM75PA6NK02 468 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 M0R2C6 588 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 FARP2O94887 1054 aaPredicted RBP14.44□□□□□ -0.1
HDAC7-226ENST00000547259 BAG3O95817 575 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 SH3BP5LQ7L8J4 393 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 UBE2Q1Q7Z7E8 422 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 AS3MTQ9HBK9 375 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
HDAC7-226ENST00000547259 AATFQ9NY61 560 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDAC7-226ENST00000547259 HERC5Q9UII4 1024 aaKnown RBP14.44□□□□□ -0.1
HDAC7-226ENST00000547259 COL2A1P02458 1487 aaPredicted RBP14.44□□□□□ -0.1
HDAC7-226ENST00000547259 A0A1W2PPC1 479 aa14.43□□□□□ -0.1
HDAC7-226ENST00000547259 MBD4O95243 580 aa14.43□□□□□ -0.1
HDAC7-226ENST00000547259 TFRCP02786 760 aaKnown RBP14.43□□□□□ -0.1
HDAC7-226ENST00000547259 PLCG2P16885 1265 aa14.43□□□□□ -0.1
HDAC7-226ENST00000547259 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
HDAC7-226ENST00000547259 ZNF280CQ8ND82 737 aa14.43□□□□□ -0.1
HDAC7-226ENST00000547259 OSBP2Q969R2 916 aa14.43□□□□□ -0.1
HDAC7-226ENST00000547259 SEC62Q99442 399 aaKnown RBP14.43□□□□□ -0.1
HDAC7-226ENST00000547259 PUS7LQ9H0K6 701 aaKnown RBP14.43□□□□□ -0.1
HDAC7-226ENST00000547259 DHX36Q9H2U1 1008 aaKnown RBP14.43□□□□□ -0.1
HDAC7-226ENST00000547259 DDX60LQ5H9U9 1706 aaKnown RBP14.42□□□□□ -0.1
HDAC7-226ENST00000547259 USP17L5A8MUK1 530 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 RHBDL3P58872 404 aa14.42□□□□□ -0.1
HDAC7-226ENST00000547259 DYNLL1P63167 89 aaKnown RBP14.42□□□□□ -0.1
HDAC7-226ENST00000547259 MCMDC2Q4G0Z9 681 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms