RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 MTMR2Q13614 643 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 TREML2Q5T2D2 321 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 RAET1EQ8TD07 263 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 EDC3Q96F86 508 aaKnown RBP12.93□□□□□ -0.34
LINC00661-202ENST00000547102 WDR18Q9BV38 432 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 TMEM106CQ9BVX2 250 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 RBBP6Q7Z6E9 1792 aaKnown RBP12.92□□□□□ -0.34
LINC00661-202ENST00000547102 C19orf81C9J6K1 198 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 USP17L10C9JJH3 530 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 MGAMO43451 1857 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 BACE1P56817 501 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 IRX3P78415 501 aaPredicted RBP12.92□□□□□ -0.34
LINC00661-202ENST00000547102 SH3D19Q5HYK7 790 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 AMOTL1Q8IY63 956 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 LCORLQ8N3X6 602 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 ZNF333Q96JL9 665 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 TRIM47Q96LD4 638 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 FEZ1Q99689 392 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
LINC00661-202ENST00000547102 TCRBV5S4A2TA0A5A2 114 aa12.91□□□□□ -0.34
LINC00661-202ENST00000547102 MBD4O95243 580 aa12.91□□□□□ -0.34
LINC00661-202ENST00000547102 GH2P01242 217 aa12.91□□□□□ -0.34
LINC00661-202ENST00000547102 ADD2P35612 726 aa12.91□□□□□ -0.34
LINC00661-202ENST00000547102 GCLCP48506 637 aaPredicted RBP12.91□□□□□ -0.34
LINC00661-202ENST00000547102 FAM110CQ1W6H9 321 aa12.91□□□□□ -0.34
LINC00661-202ENST00000547102 CERKLQ49MI3 558 aaPredicted RBP12.91□□□□□ -0.34
LINC00661-202ENST00000547102 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
LINC00661-202ENST00000547102 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
LINC00661-202ENST00000547102 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
LINC00661-202ENST00000547102 KIAA0100Q14667 2235 aaKnown RBP12.9□□□□□ -0.34
LINC00661-202ENST00000547102 PDE4DIPQ5VU43 2346 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 TNPO2O14787 897 aaKnown RBP12.9□□□□□ -0.34
LINC00661-202ENST00000547102 CTGFP29279 349 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 PRKCZQ05513 592 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 RAB3GAP1Q15042 981 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 ABCB5Q2M3G0 1257 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 SH3TC2Q8TF17 1288 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 ASCC2Q9H1I8 757 aaPredicted RBP12.9□□□□□ -0.34
LINC00661-202ENST00000547102 ARMT1Q9H993 441 aa12.9□□□□□ -0.34
LINC00661-202ENST00000547102 DCP1AQ9NPI6 582 aaPredicted RBP12.9□□□□□ -0.34
LINC00661-202ENST00000547102 POTEFA5A3E0 1075 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-202ENST00000547102 PLCD1P51178 756 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 JAG1P78504 1218 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 SHROOM1Q2M3G4 852 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-202ENST00000547102 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 COA7Q96BR5 231 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 ATP8A2Q9NTI2 1148 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-202ENST00000547102 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 PCDHB15Q9Y5E8 787 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 MYH8P13535 1937 aa12.89□□□□□ -0.35
LINC00661-202ENST00000547102 HTTP42858 3142 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 MPHOSPH10O00566 681 aaKnown RBP12.88□□□□□ -0.35
LINC00661-202ENST00000547102 ERC2O15083 957 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 GRK4P32298 578 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 SHMT1P34896 483 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 USP14P54578 494 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 UBXN2AP68543 259 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 LRRFIP1Q32MZ4 808 aaKnown RBP12.88□□□□□ -0.35
LINC00661-202ENST00000547102 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
LINC00661-202ENST00000547102 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
LINC00661-202ENST00000547102 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
LINC00661-202ENST00000547102 GABPAQ06546 454 aa12.87□□□□□ -0.35
LINC00661-202ENST00000547102 ZYXQ15942 572 aaKnown RBP12.87□□□□□ -0.35
LINC00661-202ENST00000547102 SLFNL1Q499Z3 407 aa12.87□□□□□ -0.35
LINC00661-202ENST00000547102 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
LINC00661-202ENST00000547102 KBTBD3Q8NAB2 608 aa12.87□□□□□ -0.35
LINC00661-202ENST00000547102 BAZ2AQ9UIF9 1905 aaKnown RBP12.87□□□□□ -0.35
LINC00661-202ENST00000547102 PRKAB2O43741 272 aa12.86□□□□□ -0.35
LINC00661-202ENST00000547102 ADCY3O60266 1144 aa12.86□□□□□ -0.35
LINC00661-202ENST00000547102 ZFYP08048 801 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-202ENST00000547102 CYP2D6P10635 497 aa12.86□□□□□ -0.35
LINC00661-202ENST00000547102 FLT3LGP49771 235 aa12.86□□□□□ -0.35
LINC00661-202ENST00000547102 HERVK_113P62684 666 aa12.86□□□□□ -0.35
LINC00661-202ENST00000547102 CCAR1Q8IX12 1150 aaKnown RBP12.86□□□□□ -0.35
LINC00661-202ENST00000547102 C12orf42Q96LP6 360 aa12.86□□□□□ -0.35
LINC00661-202ENST00000547102 GABRQQ9UN88 632 aa12.86□□□□□ -0.35
LINC00661-202ENST00000547102 RNF113AO15541 343 aaKnown RBP12.85□□□□□ -0.35
LINC00661-202ENST00000547102 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
LINC00661-202ENST00000547102 CHGBP05060 677 aa12.85□□□□□ -0.35
LINC00661-202ENST00000547102 EN2P19622 333 aaPredicted RBP12.85□□□□□ -0.35
LINC00661-202ENST00000547102 MX1P20591 662 aa12.85□□□□□ -0.35
LINC00661-202ENST00000547102 IRF5Q13568 498 aa12.85□□□□□ -0.35
LINC00661-202ENST00000547102 AAMPQ13685 434 aa12.85□□□□□ -0.35
LINC00661-202ENST00000547102 SEPT2Q15019 361 aa12.85□□□□□ -0.35
LINC00661-202ENST00000547102 TMEM179Q6ZVK1 233 aa12.85□□□□□ -0.35
LINC00661-202ENST00000547102 GPRC5AQ8NFJ5 357 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms