RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 GDF11O95390 407 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 CHGBP05060 677 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 PLCD1P51178 756 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 SPP2Q13103 211 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 DDRGK1Q96HY6 314 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 WDR18Q9BV38 432 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 PUS7LQ9H0K6 701 aaKnown RBP19.13■□□□□ 0.65
DDX54-204ENST00000546898 STAP2Q9UGK3 403 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 ADGRA2Q96PE1 1338 aa19.13■□□□□ 0.65
DDX54-204ENST00000546898 MGAMO43451 1857 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 GABPAQ06546 454 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 ARHGEF6Q15052 776 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 SH3D19Q5HYK7 790 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 FBXO46Q6PJ61 603 aaPredicted RBP19.12■□□□□ 0.65
DDX54-204ENST00000546898 AMOTL1Q8IY63 956 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 CD99L2Q8TCZ2 262 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 AGTPBP1Q9UPW5 1226 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 SLC4A4Q9Y6R1 1079 aa19.12■□□□□ 0.65
DDX54-204ENST00000546898 ZSWIM8A7E2V4 1837 aa19.11■□□□□ 0.65
DDX54-204ENST00000546898 PRKAB2O43741 272 aa19.11■□□□□ 0.65
DDX54-204ENST00000546898 C17orf99Q6UX52 265 aa19.11■□□□□ 0.65
DDX54-204ENST00000546898 OTOP1Q7RTM1 612 aa19.11■□□□□ 0.65
DDX54-204ENST00000546898 FSD1Q9BTV5 496 aa19.11■□□□□ 0.65
DDX54-204ENST00000546898 SWAP70Q9UH65 585 aa19.11■□□□□ 0.65
DDX54-204ENST00000546898 TRIM17Q9Y577 477 aa19.11■□□□□ 0.65
DDX54-204ENST00000546898 CCDC85CA6NKD9 419 aa19.1■□□□□ 0.65
DDX54-204ENST00000546898 SHMT1P34896 483 aa19.1■□□□□ 0.65
DDX54-204ENST00000546898 PDE1AP54750 535 aa19.1■□□□□ 0.65
DDX54-204ENST00000546898 JAG1P78504 1218 aa19.1■□□□□ 0.65
DDX54-204ENST00000546898 PABPC4Q13310 644 aaKnown RBP eCLIP19.1■□□□□ 0.65
DDX54-204ENST00000546898 CERKLQ49MI3 558 aaPredicted RBP19.1■□□□□ 0.65
DDX54-204ENST00000546898 EFCC1Q9HA90 598 aa19.1■□□□□ 0.65
DDX54-204ENST00000546898 PNMA3Q9UL41 463 aa19.1■□□□□ 0.65
DDX54-204ENST00000546898 C19orf81C9J6K1 198 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 GH2P01242 217 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 IGHDP01880 384 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 HMGCS2P54868 508 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 BACE1P56817 501 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 KIF22Q14807 665 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 ABCB5Q2M3G0 1257 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 GIMAP6Q6P9H5 292 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 OSBP2Q969R2 916 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 STRBPQ96SI9 672 aaKnown RBP19.09■□□□□ 0.65
DDX54-204ENST00000546898 LNPKQ9C0E8 428 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 CABP5Q9NP86 173 aa19.09■□□□□ 0.65
DDX54-204ENST00000546898 ARPP21Q9UBL0 812 aaPredicted RBP19.09■□□□□ 0.65
DDX54-204ENST00000546898 USP17L10C9JJH3 530 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 GPAA1O43292 621 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 CYP2C8P10632 490 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 GNAT2P19087 354 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 LACTBP83111 547 aaPredicted RBP19.08■□□□□ 0.64
DDX54-204ENST00000546898 NUCB1Q02818 461 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 MTMR2Q13614 643 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 SHROOM1Q2M3G4 852 aaPredicted RBP19.08■□□□□ 0.64
DDX54-204ENST00000546898 C12orf60Q5U649 245 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 CHD1LQ86WJ1 897 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 CPA4Q9UI42 421 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 HPS5Q9UPZ3 1129 aa19.08■□□□□ 0.64
DDX54-204ENST00000546898 GNRH1P01148 92 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 CYP2D6P10635 497 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 BCRP11274 1271 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 TREML2Q5T2D2 321 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 B4GALNT3Q6L9W6 998 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 TICAM2Q86XR7 235 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 EVI5LQ96CN4 794 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 TMOD4Q9NZQ9 345 aa19.07■□□□□ 0.64
DDX54-204ENST00000546898 USP17L12C9JPN9 530 aa19.06■□□□□ 0.64
DDX54-204ENST00000546898 USP17L21D6R901 530 aa19.06■□□□□ 0.64
DDX54-204ENST00000546898 EVX2Q03828 476 aa19.06■□□□□ 0.64
DDX54-204ENST00000546898 ZMYM1Q5SVZ6 1142 aa19.06■□□□□ 0.64
DDX54-204ENST00000546898 SMCR8Q8TEV9 937 aaPredicted RBP19.06■□□□□ 0.64
DDX54-204ENST00000546898 PTPN22Q9Y2R2 807 aa19.06■□□□□ 0.64
DDX54-204ENST00000546898 GREB1LQ9C091 1923 aaPredicted RBP19.06■□□□□ 0.64
DDX54-204ENST00000546898 GSG1L2A8MUP6 293 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 M0R2C6 588 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 OSBPP22059 807 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 CAP1Q01518 475 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 RAB3GAP1Q15042 981 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 SBK1Q52WX2 424 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 CTR9Q6PD62 1173 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 C16orf86Q6ZW13 317 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 ROBO3Q96MS0 1386 aa19.05■□□□□ 0.64
DDX54-204ENST00000546898 USP14P54578 494 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
DDX54-204ENST00000546898 USP17L2Q6R6M4 530 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 TMEM179Q6ZVK1 233 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 SLC44A5Q8NCS7 719 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 DYNLL2Q96FJ2 89 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 C12orf42Q96LP6 360 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 CCDC17Q96LX7 622 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 FEZ1Q99689 392 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 OSBPL3Q9H4L5 887 aa19.04■□□□□ 0.64
DDX54-204ENST00000546898 RBBP6Q7Z6E9 1792 aaKnown RBP19.04■□□□□ 0.64
DDX54-204ENST00000546898 CYP2D7A0A087X1C5 515 aa19.03■□□□□ 0.64
DDX54-204ENST00000546898 MPHOSPH10O00566 681 aaKnown RBP19.03■□□□□ 0.64
DDX54-204ENST00000546898 HOXA7P31268 230 aaPredicted RBP19.03■□□□□ 0.64
DDX54-204ENST00000546898 GCLCP48506 637 aaPredicted RBP19.03■□□□□ 0.64
DDX54-204ENST00000546898 CDK8P49336 464 aa19.03■□□□□ 0.64
DDX54-204ENST00000546898 PRMT2P55345 433 aa19.03■□□□□ 0.64
DDX54-204ENST00000546898 KIAA1683Q9H0B3 1180 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms