RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 TMEM265A0A087WTH1 108 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 C19orf81C9J6K1 198 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 CIAO1O76071 339 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 MAP4K4O95819 1239 aaPredicted RBP11.48□□□□□ -0.57
SSH1-205ENST00000546812 MAP2K5Q13163 448 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 RASGRF1Q13972 1273 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 MFSD14CQ5VZR4 134 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 GTF3C2Q8WUA4 911 aaPredicted RBP11.48□□□□□ -0.57
SSH1-205ENST00000546812 EDC3Q96F86 508 aaKnown RBP11.48□□□□□ -0.57
SSH1-205ENST00000546812 HERC5Q9UII4 1024 aaKnown RBP11.48□□□□□ -0.57
SSH1-205ENST00000546812 PHIPQ8WWQ0 1821 aa11.48□□□□□ -0.57
SSH1-205ENST00000546812 DOCK1Q14185 1865 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 PDS5AQ29RF7 1337 aaKnown RBP11.47□□□□□ -0.57
SSH1-205ENST00000546812 MECOMQ03112 1051 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 POTEEQ6S8J3 1075 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 BADQ92934 168 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 SIL1Q9H173 461 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 FLRT1Q9NZU1 646 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 RAPGEFL1Q9UHV5 662 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 ATP11BQ9Y2G3 1177 aa11.47□□□□□ -0.57
SSH1-205ENST00000546812 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
SSH1-205ENST00000546812 PLXNB2O15031 1838 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 DOCK2Q92608 1830 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 GLRX3O76003 335 aaKnown RBP11.46□□□□□ -0.57
SSH1-205ENST00000546812 ASNSP08243 561 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 CNGA1P29973 690 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 ADORA1P30542 326 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 PLA2G5P39877 138 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 SLC39A5Q6ZMH5 540 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 ZNF384Q8TF68 577 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 PAGR1Q9BTK6 254 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 PRDM5Q9NQX1 630 aaPredicted RBP11.46□□□□□ -0.57
SSH1-205ENST00000546812 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.57
SSH1-205ENST00000546812 SLC15A5A6NIM6 579 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 LDHCP07864 332 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 HOXC6P09630 235 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
SSH1-205ENST00000546812 JAG1P78504 1218 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 USP38Q8NB14 1042 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 ARRDC4Q8NCT1 418 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 FAM122AQ96E09 287 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 CWC22Q9HCG8 908 aaKnown RBP11.45□□□□□ -0.58
SSH1-205ENST00000546812 RABGAP1Q9Y3P9 1069 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 LOC285556D6RIA3 1793 aa11.45□□□□□ -0.58
SSH1-205ENST00000546812 TRIM43BA6NCK2 446 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 PTPREP23469 700 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 CCNA1P78396 465 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 GSTO1P78417 241 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 SNX17Q15036 470 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 TRIM60Q495X7 471 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
SSH1-205ENST00000546812 MRPL50Q8N5N7 158 aaKnown RBP11.44□□□□□ -0.58
SSH1-205ENST00000546812 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 TRIM43Q96BQ3 446 aaPredicted RBP11.44□□□□□ -0.58
SSH1-205ENST00000546812 DHX36Q9H2U1 1008 aaKnown RBP11.44□□□□□ -0.58
SSH1-205ENST00000546812 PDLIM7Q9NR12 457 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 EMILIN3Q9NT22 766 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 GINM1Q9NU53 330 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 NDUFB9Q9Y6M9 179 aa11.44□□□□□ -0.58
SSH1-205ENST00000546812 BDP1A6H8Y1 2624 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 PTPRCP08575 1304 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 NCOR1O75376 2440 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 KBTBD13C9JR72 458 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 CNMDO75829 334 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 IGHA2P01877 340 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 CYP2C19P33261 490 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 TIMM10P62072 90 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 C1orf53Q5VUE5 145 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 USP17L2Q6R6M4 530 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 SH3RF1Q7Z6J0 888 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 METTL16Q86W50 562 aaKnown RBP11.43□□□□□ -0.58
SSH1-205ENST00000546812 TEX11Q8IYF3 940 aa11.43□□□□□ -0.58
SSH1-205ENST00000546812 ATXN2LQ8WWM7 1075 aaKnown RBP11.43□□□□□ -0.58
SSH1-205ENST00000546812 NSUN4Q96CB9 384 aaKnown RBP11.43□□□□□ -0.58
SSH1-205ENST00000546812 RNPC3Q96LT9 517 aaKnown RBP11.43□□□□□ -0.58
SSH1-205ENST00000546812 CYBAP13498 195 aa11.42□□□□□ -0.58
SSH1-205ENST00000546812 GRB14Q14449 540 aa11.42□□□□□ -0.58
SSH1-205ENST00000546812 WDR78Q5VTH9 848 aa11.42□□□□□ -0.58
SSH1-205ENST00000546812 FOXP4Q8IVH2 680 aaPredicted RBP11.42□□□□□ -0.58
SSH1-205ENST00000546812 NPLOC4Q8TAT6 608 aa11.42□□□□□ -0.58
SSH1-205ENST00000546812 IVNS1ABPQ9Y6Y0 642 aa11.42□□□□□ -0.58
SSH1-205ENST00000546812 MYH2Q9UKX2 1941 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.41□□□□□ -0.58
SSH1-205ENST00000546812 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L15C9J2P7 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L13C9JLJ4 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L11C9JVI0 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L18D6R9N7 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L22D6RA61 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L17D6RBQ6 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L19D6RCP7 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 USP17L20D6RJB6 530 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 GDF11O95390 407 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 DNAJB2P25686 324 aa11.41□□□□□ -0.58
SSH1-205ENST00000546812 ADCYAP1R1P41586 468 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms