RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 ZNF746Q6NUN9 644 aaPredicted RBP9.78□□□□□ -0.84
CPNE8-204ENST00000546603 LETMD1Q6P1Q0 360 aa9.78□□□□□ -0.84
CPNE8-204ENST00000546603 FAM196AQ6ZSG2 479 aa9.78□□□□□ -0.84
CPNE8-204ENST00000546603 MCATQ8IVS2 390 aaKnown RBP9.78□□□□□ -0.84
CPNE8-204ENST00000546603 BACH2Q9BYV9 841 aa9.78□□□□□ -0.84
CPNE8-204ENST00000546603 KCNQ5Q9NR82 932 aa9.78□□□□□ -0.84
CPNE8-204ENST00000546603 MAPK8IP1Q9UQF2 711 aa9.78□□□□□ -0.84
CPNE8-204ENST00000546603 GNAT3A8MTJ3 354 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 PLCG1P19174 1290 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 LDLRAD1Q5T700 205 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 FBXL19Q6PCT2 694 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 TP53INP2Q8IXH6 220 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 FLCNQ8NFG4 579 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 BCL7CQ8WUZ0 217 aaPredicted RBP9.77□□□□□ -0.85
CPNE8-204ENST00000546603 VAV3Q9UKW4 847 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
CPNE8-204ENST00000546603 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
CPNE8-204ENST00000546603 SNX11Q9Y5W9 270 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 U3KQE9 123 aa9.77□□□□□ -0.85
CPNE8-204ENST00000546603 PRKCQQ04759 706 aa9.76□□□□□ -0.85
CPNE8-204ENST00000546603 TMEM201Q5SNT2 666 aa9.76□□□□□ -0.85
CPNE8-204ENST00000546603 AGBL5Q8NDL9 886 aa9.76□□□□□ -0.85
CPNE8-204ENST00000546603 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
CPNE8-204ENST00000546603 PLAGL2Q9UPG8 496 aa9.76□□□□□ -0.85
CPNE8-204ENST00000546603 CORINQ9Y5Q5 1042 aa9.76□□□□□ -0.85
CPNE8-204ENST00000546603 PRR36Q9H6K5 1346 aa9.76□□□□□ -0.85
CPNE8-204ENST00000546603 GREM1O60565 184 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 ITIH2P19823 946 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 ZNF76P36508 570 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 SFRP5Q5T4F7 317 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 NFXL1Q6ZNB6 911 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 XAGE3Q8WTP9 111 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-204ENST00000546603 TNKS2Q9H2K2 1166 aa9.75□□□□□ -0.85
CPNE8-204ENST00000546603 METTL5Q9NRN9 209 aaKnown RBP9.75□□□□□ -0.85
CPNE8-204ENST00000546603 CYP7A1P22680 504 aa9.74□□□□□ -0.85
CPNE8-204ENST00000546603 VAMP1P23763 118 aa9.74□□□□□ -0.85
CPNE8-204ENST00000546603 IRAK1P51617 712 aa9.74□□□□□ -0.85
CPNE8-204ENST00000546603 CWF19L2Q2TBE0 894 aaKnown RBP9.74□□□□□ -0.85
CPNE8-204ENST00000546603 RIN3Q8TB24 985 aa9.74□□□□□ -0.85
CPNE8-204ENST00000546603 COX4I2Q96KJ9 171 aa9.74□□□□□ -0.85
CPNE8-204ENST00000546603 HRASLS5Q96KN8 279 aa9.74□□□□□ -0.85
CPNE8-204ENST00000546603 PAK6Q9NQU5 681 aaPredicted RBP9.74□□□□□ -0.85
CPNE8-204ENST00000546603 YARSP54577 528 aaKnown RBP9.73□□□□□ -0.85
CPNE8-204ENST00000546603 AOC3Q16853 763 aa9.73□□□□□ -0.85
CPNE8-204ENST00000546603 C22orf34Q6ZV56 151 aa9.73□□□□□ -0.85
CPNE8-204ENST00000546603 FBXO27Q8NI29 283 aa9.73□□□□□ -0.85
CPNE8-204ENST00000546603 DPH2Q9BQC3 489 aaPredicted RBP9.73□□□□□ -0.85
CPNE8-204ENST00000546603 LRRC3Q9BY71 257 aa9.73□□□□□ -0.85
CPNE8-204ENST00000546603 POLR3KQ9Y2Y1 108 aaPredicted RBP9.73□□□□□ -0.85
CPNE8-204ENST00000546603 ETV3P41162 512 aa9.72□□□□□ -0.85
CPNE8-204ENST00000546603 BNIP3Q12983 259 aa9.72□□□□□ -0.85
CPNE8-204ENST00000546603 ABI1Q8IZP0 508 aa9.72□□□□□ -0.85
CPNE8-204ENST00000546603 FAM13CQ8NE31 585 aa9.72□□□□□ -0.85
CPNE8-204ENST00000546603 REV1Q9UBZ9 1251 aa9.72□□□□□ -0.85
CPNE8-204ENST00000546603 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
CPNE8-204ENST00000546603 TLR3O15455 904 aaKnown RBP9.71□□□□□ -0.86
CPNE8-204ENST00000546603 GRIN3BO60391 1043 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 HTR3BO95264 441 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 ZNF865P0CJ78 1059 aaPredicted RBP9.71□□□□□ -0.86
CPNE8-204ENST00000546603 CLCN7P51798 805 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 MLECQ14165 292 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 NKPD1Q17RQ9 610 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 SPRED2Q7Z698 418 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 CDH24Q86UP0 819 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 SPACA3Q8IXA5 215 aa9.71□□□□□ -0.86
CPNE8-204ENST00000546603 FAM155AB1AL88 458 aaPredicted RBP9.7□□□□□ -0.86
CPNE8-204ENST00000546603 FANCCQ00597 558 aa9.7□□□□□ -0.86
CPNE8-204ENST00000546603 SLFN12Q8IYM2 578 aa9.7□□□□□ -0.86
CPNE8-204ENST00000546603 MFSD4AQ8N468 514 aa9.7□□□□□ -0.86
CPNE8-204ENST00000546603 RGS22Q8NE09 1264 aa9.7□□□□□ -0.86
CPNE8-204ENST00000546603 ASB11Q8WXH4 323 aa9.7□□□□□ -0.86
CPNE8-204ENST00000546603 RNF34Q969K3 372 aa9.7□□□□□ -0.86
CPNE8-204ENST00000546603 CEP131Q9UPN4 1083 aa9.7□□□□□ -0.86
CPNE8-204ENST00000546603 UPK3BL1B0FP48 263 aa9.69□□□□□ -0.86
CPNE8-204ENST00000546603 UPK3BL2E5RIL1 263 aa9.69□□□□□ -0.86
CPNE8-204ENST00000546603 SCAMP3O14828 347 aaKnown RBP9.69□□□□□ -0.86
CPNE8-204ENST00000546603 CD8BP10966 210 aa9.69□□□□□ -0.86
CPNE8-204ENST00000546603 KIR3DL1P43629 444 aa9.69□□□□□ -0.86
CPNE8-204ENST00000546603 ZNF574Q6ZN55 896 aaPredicted RBP9.69□□□□□ -0.86
CPNE8-204ENST00000546603 CYB5D2Q8WUJ1 264 aa9.69□□□□□ -0.86
CPNE8-204ENST00000546603 CNTNAP4Q9C0A0 1308 aa9.69□□□□□ -0.86
CPNE8-204ENST00000546603 ADGRE2Q9UHX3 823 aa9.69□□□□□ -0.86
CPNE8-204ENST00000546603 CCDC9Q9Y3X0 531 aaKnown RBP9.69□□□□□ -0.86
CPNE8-204ENST00000546603 CBX7O95931 251 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 APOBRQ0VD83 1088 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 USP48Q86UV5 1035 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 WFDC3Q8IUB2 231 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 DNAJB8Q8NHS0 232 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 NT5C1AQ9BXI3 368 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 BRMS1Q9HCU9 246 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 KLHL3Q9UH77 587 aa9.68□□□□□ -0.86
CPNE8-204ENST00000546603 COL17A1Q9UMD9 1497 aaPredicted RBP9.67□□□□□ -0.86
CPNE8-204ENST00000546603 PRR33A8MZF0 331 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 ATE1O95260 518 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 RECKO95980 971 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 CRKP46108 304 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 PLCL1Q15111 1095 aa9.67□□□□□ -0.86
CPNE8-204ENST00000546603 KIAA0825Q8IV33 1275 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms