RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 GADL1Q6ZQY3 521 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
SSH1-203ENST00000546433 TUBB2AQ13885 445 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 TUBB2BQ9BVA1 445 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 PABPN1LA6NDY0 278 aaKnown RBP11.7□□□□□ -0.54
SSH1-203ENST00000546433 KIF4AO95239 1232 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
SSH1-203ENST00000546433 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 PPP1R14CQ8TAE6 165 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 MRVI1Q9Y6F6 885 aa11.7□□□□□ -0.54
SSH1-203ENST00000546433 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 CCDC129Q6ZRS4 1044 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 IQCGQ9H095 443 aaKnown RBP11.69□□□□□ -0.54
SSH1-203ENST00000546433 CD2APQ9Y5K6 639 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 CTSWP56202 376 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 CCDC65Q8IXS2 484 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 LUC7L2Q9Y383 392 aaKnown RBP11.69□□□□□ -0.54
SSH1-203ENST00000546433 COMMD10Q9Y6G5 202 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 NRXN1Q9ULB1 1477 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 MCM7P33993 719 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 HSPA4P34932 840 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 NCBP1Q09161 790 aaKnown RBP11.69□□□□□ -0.54
SSH1-203ENST00000546433 TRPM1Q7Z4N2 1603 aa11.69□□□□□ -0.54
SSH1-203ENST00000546433 ZNF830Q96NB3 372 aaPredicted RBP11.68□□□□□ -0.54
SSH1-203ENST00000546433 TNNQ9UQP3 1299 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 LMNB1P20700 586 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 GRAPQ13588 217 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 VWA3BQ502W6 1294 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
SSH1-203ENST00000546433 BRIP1Q9BX63 1249 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 IFNKQ9P0W0 207 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 MBD4O95243 580 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 TNNC1P63316 161 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 GTF2IP78347 998 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 SLC27A2O14975 620 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 SREBF2Q12772 1141 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 APBB1IPQ7Z5R6 666 aaPredicted RBP11.68□□□□□ -0.54
SSH1-203ENST00000546433 ARFGAP2Q8N6H7 521 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 SMC1BQ8NDV3 1235 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 APPBP2Q92624 585 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 CEP63Q96MT8 703 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 TTF2Q9UNY4 1162 aaKnown RBP11.68□□□□□ -0.54
SSH1-203ENST00000546433 CHL1O00533 1208 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 GCKRQ14397 625 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
SSH1-203ENST00000546433 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
SSH1-203ENST00000546433 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 CEP83Q9Y592 693 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 AKR1B15C9JRZ8 316 aaPredicted RBP11.67□□□□□ -0.54
SSH1-203ENST00000546433 PTGS1P23219 599 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 TRMT1LQ7Z2T5 733 aaKnown RBP11.67□□□□□ -0.54
SSH1-203ENST00000546433 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 C3P01024 1663 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 A0A1B0GUL7 405 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 ANKS4BQ8N8V4 417 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 PCCAP05165 728 aaPredicted RBP11.67□□□□□ -0.54
SSH1-203ENST00000546433 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 STYK1Q6J9G0 422 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 JAKMIP2Q96AA8 810 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 SSX2IPQ9Y2D8 614 aa11.67□□□□□ -0.54
SSH1-203ENST00000546433 HSP90AA4PQ58FG1 418 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 CEP128Q6ZU80 1094 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 DHX37Q8IY37 1157 aaKnown RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 LPIN2Q92539 896 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 MTRF1LQ9UGC7 380 aaKnown RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 CUTAO60888 179 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 VAV2P52735 878 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 USP14P54578 494 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 CNNM4Q6P4Q7 775 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 CHST3Q7LGC8 479 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 ARHGEF1Q92888 912 aaKnown RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 TIGD1Q96MW7 591 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 ANO1Q5XXA6 986 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 ANGEL1Q9UNK9 670 aaKnown RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 CPDO75976 1380 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 ADGRB2O60241 1585 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 EIF4A1P60842 406 aaKnown RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 NAP1L3Q99457 506 aaPredicted RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
SSH1-203ENST00000546433 CLSTN2Q9H4D0 955 aa11.66□□□□□ -0.54
SSH1-203ENST00000546433 E9PCH4 1651 aa11.65□□□□□ -0.54
SSH1-203ENST00000546433 ARHGAP23Q9P227 1491 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms