RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 GPAT2Q6NUI2 795 aa14.29□□□□□ -0.12
YBX3-217ENST00000546164 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
YBX3-217ENST00000546164 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
YBX3-217ENST00000546164 STRBPQ96SI9 672 aaKnown RBP14.29□□□□□ -0.12
YBX3-217ENST00000546164 WDR18Q9BV38 432 aa14.29□□□□□ -0.12
YBX3-217ENST00000546164 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
YBX3-217ENST00000546164 MYH1P12882 1939 aa14.29□□□□□ -0.12
YBX3-217ENST00000546164 POLR3DP05423 398 aaPredicted RBP14.28□□□□□ -0.12
YBX3-217ENST00000546164 JAG1P78504 1218 aa14.28□□□□□ -0.12
YBX3-217ENST00000546164 SLC4A8Q2Y0W8 1093 aa14.28□□□□□ -0.12
YBX3-217ENST00000546164 CTU1Q7Z7A3 348 aaKnown RBP14.28□□□□□ -0.12
YBX3-217ENST00000546164 CCDC84Q86UT8 332 aaPredicted RBP14.28□□□□□ -0.12
YBX3-217ENST00000546164 ZNF280CQ8ND82 737 aa14.28□□□□□ -0.12
YBX3-217ENST00000546164 OSBPL3Q9H4L5 887 aa14.28□□□□□ -0.12
YBX3-217ENST00000546164 AS3MTQ9HBK9 375 aa14.28□□□□□ -0.12
YBX3-217ENST00000546164 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
YBX3-217ENST00000546164 SLC45A1Q9Y2W3 748 aa14.28□□□□□ -0.12
YBX3-217ENST00000546164 NAV1Q8NEY1 1877 aa14.27□□□□□ -0.12
YBX3-217ENST00000546164 PHIPQ8WWQ0 1821 aa14.27□□□□□ -0.12
YBX3-217ENST00000546164 TRIM75PA6NK02 468 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 PDHXO00330 501 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 TLR2O60603 784 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 SHMT1P34896 483 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 IRX6P78412 446 aaPredicted RBP14.27□□□□□ -0.13
YBX3-217ENST00000546164 SPP2Q13103 211 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 DGKZQ13574 1117 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 SH3D19Q5HYK7 790 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 B4GALNT3Q6L9W6 998 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 EVI5LQ96CN4 794 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 FSD1Q9BTV5 496 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 MCOLN1Q9GZU1 580 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 SLC4A4Q9Y6R1 1079 aa14.27□□□□□ -0.13
YBX3-217ENST00000546164 ADGRA2Q96PE1 1338 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 GPAA1O43292 621 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 GDF11O95390 407 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 GNAT2P19087 354 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 SP3Q02447 781 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 PKN2Q16513 984 aaKnown RBP14.26□□□□□ -0.13
YBX3-217ENST00000546164 ZMYM1Q5SVZ6 1142 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 C12orf60Q5U649 245 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 PLEKHM2Q8IWE5 1019 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 PROCA1Q8NCQ7 364 aaPredicted RBP14.26□□□□□ -0.13
YBX3-217ENST00000546164 PARK7Q99497 189 aaKnown RBP14.26□□□□□ -0.13
YBX3-217ENST00000546164 SWAP70Q9UH65 585 aa14.26□□□□□ -0.13
YBX3-217ENST00000546164 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 USP17L12C9JPN9 530 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 USP17L21D6R901 530 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 M0R2C6 588 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 GH2P01242 217 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 CYP2D6P10635 497 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 BACE1P56817 501 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 EVX2Q03828 476 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 SHROOM1Q2M3G4 852 aaPredicted RBP14.25□□□□□ -0.13
YBX3-217ENST00000546164 CERKLQ49MI3 558 aaPredicted RBP14.25□□□□□ -0.13
YBX3-217ENST00000546164 C17orf99Q6UX52 265 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 AMOTL1Q8IY63 956 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 ERO1AQ96HE7 468 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 ARPP21Q9UBL0 812 aaPredicted RBP14.25□□□□□ -0.13
YBX3-217ENST00000546164 AGTPBP1Q9UPW5 1226 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 HTTP42858 3142 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 PTPRFP10586 1907 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
YBX3-217ENST00000546164 C19orf81C9J6K1 198 aa14.24□□□□□ -0.13
YBX3-217ENST00000546164 ABCB5Q2M3G0 1257 aa14.24□□□□□ -0.13
YBX3-217ENST00000546164 SBK1Q52WX2 424 aa14.24□□□□□ -0.13
YBX3-217ENST00000546164 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
YBX3-217ENST00000546164 GADL1Q6ZQY3 521 aa14.24□□□□□ -0.13
YBX3-217ENST00000546164 USP17L10C9JJH3 530 aa14.23□□□□□ -0.13
YBX3-217ENST00000546164 HMGCS2P54868 508 aa14.23□□□□□ -0.13
YBX3-217ENST00000546164 MTMR2Q13614 643 aa14.23□□□□□ -0.13
YBX3-217ENST00000546164 C16orf86Q6ZW13 317 aa14.23□□□□□ -0.13
YBX3-217ENST00000546164 SEC62Q99442 399 aaKnown RBP14.23□□□□□ -0.13
YBX3-217ENST00000546164 EPB41L4AQ9HCS5 686 aaPredicted RBP14.23□□□□□ -0.13
YBX3-217ENST00000546164 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
YBX3-217ENST00000546164 CYP2D7A0A087X1C5 515 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 PATL2C9JE40 543 aaKnown RBP14.22□□□□□ -0.13
YBX3-217ENST00000546164 CYP2C8P10632 490 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 BCRP11274 1271 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 PABPC4Q13310 644 aaKnown RBP eCLIP14.22□□□□□ -0.133e-49■■■□□ 17.2
YBX3-217ENST00000546164 ARHGEF6Q15052 776 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 TREML2Q5T2D2 321 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 SLC44A5Q8NCS7 719 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 CD99L2Q8TCZ2 262 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 DYNLL2Q96FJ2 89 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 CCDC17Q96LX7 622 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 LOC285556D6RIA3 1793 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
YBX3-217ENST00000546164 SMIM22K7EJ46 135 aa14.21□□□□□ -0.13
YBX3-217ENST00000546164 HOXA7P31268 230 aaPredicted RBP14.21□□□□□ -0.13
YBX3-217ENST00000546164 CDK8P49336 464 aa14.21□□□□□ -0.13
YBX3-217ENST00000546164 LACTBP83111 547 aaPredicted RBP14.21□□□□□ -0.13
YBX3-217ENST00000546164 CAP1Q01518 475 aa14.21□□□□□ -0.13
YBX3-217ENST00000546164 FBXO46Q6PJ61 603 aaPredicted RBP14.21□□□□□ -0.13
YBX3-217ENST00000546164 TMEM179Q6ZVK1 233 aa14.21□□□□□ -0.13
YBX3-217ENST00000546164 OTOP1Q7RTM1 612 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms