RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ZNF827Q17R98 1081 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 TRIM22Q8IYM9 498 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 KRT222Q8N1A0 295 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 ZNF579Q8NAF0 562 aaKnown RBP17.51■□□□□ 0.39
CNN3-207ENST00000545882 SRPRBQ9Y5M8 271 aaKnown RBP17.51■□□□□ 0.39
CNN3-207ENST00000545882 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 KIF20AO95235 890 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 GNAT2P19087 354 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 TDO2P48775 406 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
CNN3-207ENST00000545882 ENOX1Q8TC92 643 aaKnown RBP17.51■□□□□ 0.39
CNN3-207ENST00000545882 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 ADGRA1Q86SQ6 560 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 TRMT44Q8IYL2 757 aaKnown RBP17.5■□□□□ 0.39
CNN3-207ENST00000545882 ZNF654Q8IZM8 581 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 TC2NQ8N9U0 490 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 MIGA1Q8NAN2 632 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 MTA3Q9BTC8 594 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 TOMM22Q9NS69 142 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 PPP2R2CQ9Y2T4 447 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 NFE2L3Q9Y4A8 694 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
CNN3-207ENST00000545882 CACNA1SQ13698 1873 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 ARHGAP6O43182 974 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
CNN3-207ENST00000545882 SEC23AQ15436 765 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 MLKLQ8NB16 471 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 SPATA20Q8TB22 786 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 CDCA7Q9BWT1 371 aaPredicted RBP17.49■□□□□ 0.39
CNN3-207ENST00000545882 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 SPATA31A1Q5TZJ5 1347 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 TAF1P21675 1872 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 MYH14Q7Z406 1995 aaKnown RBP17.49■□□□□ 0.39
CNN3-207ENST00000545882 FAM205CA6NFA0 338 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 CLCN6P51797 869 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 RCAN1P53805 252 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 PPARAQ07869 468 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 SMARCE1Q969G3 411 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 NACAP1Q9BZK3 213 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 CSRNP2Q9H175 543 aa17.49■□□□□ 0.39
CNN3-207ENST00000545882 SAMSN1Q9NSI8 373 aaKnown RBP17.49■□□□□ 0.39
CNN3-207ENST00000545882 HOOK1Q9UJC3 728 aaKnown RBP17.49■□□□□ 0.39
CNN3-207ENST00000545882 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
CNN3-207ENST00000545882 TMTC2Q8N394 836 aa17.48■□□□□ 0.39
CNN3-207ENST00000545882 PDILTQ8N807 584 aa17.48■□□□□ 0.39
CNN3-207ENST00000545882 TRIML1Q8N9V2 468 aa17.48■□□□□ 0.39
CNN3-207ENST00000545882 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
CNN3-207ENST00000545882 BAG1Q99933 345 aaPredicted RBP17.48■□□□□ 0.39
CNN3-207ENST00000545882 CABP5Q9NP86 173 aa17.48■□□□□ 0.39
CNN3-207ENST00000545882 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
CNN3-207ENST00000545882 A0A087X0B3 334 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 TADA3O75528 432 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 ADKP55263 362 aaKnown RBP17.47■□□□□ 0.39
CNN3-207ENST00000545882 PKN1Q16512 942 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 ARHGAP29Q52LW3 1261 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 EARS2Q5JPH6 523 aaKnown RBP17.47■□□□□ 0.39
CNN3-207ENST00000545882 INTS5Q6P9B9 1019 aaKnown RBP17.47■□□□□ 0.39
CNN3-207ENST00000545882 FHOD1Q9Y613 1164 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 CCDC196A0A1B0GTZ2 297 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 ERICH2A1L162 156 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 FUT2Q10981 343 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 NR1I3Q14994 352 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 TERF2Q15554 542 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 SPECC1LQ69YQ0 1117 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 TOGARAM2Q6ZUX3 1019 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
CNN3-207ENST00000545882 MYH13Q9UKX3 1938 aa17.46■□□□□ 0.39
CNN3-207ENST00000545882 STX10O60499 249 aa17.46■□□□□ 0.39
CNN3-207ENST00000545882 URI1O94763 535 aaPredicted RBP17.46■□□□□ 0.39
CNN3-207ENST00000545882 PLCD1P51178 756 aa17.46■□□□□ 0.39
CNN3-207ENST00000545882 APTXQ7Z2E3 356 aaKnown RBP17.46■□□□□ 0.39
CNN3-207ENST00000545882 WDR24Q96S15 920 aa17.46■□□□□ 0.39
CNN3-207ENST00000545882 RNF26Q9BY78 433 aaPredicted RBP17.46■□□□□ 0.39
CNN3-207ENST00000545882 ST7Q9NRC1 585 aa17.46■□□□□ 0.39
CNN3-207ENST00000545882 ANAPC4Q9UJX5 808 aa17.46■□□□□ 0.39
CNN3-207ENST00000545882 LTBP4Q8N2S1 1624 aa17.46■□□□□ 0.38
CNN3-207ENST00000545882 WNT7AO00755 349 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 CDK11BP21127 795 aaKnown RBP17.45■□□□□ 0.38
CNN3-207ENST00000545882 CARD6Q9BX69 1037 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
CNN3-207ENST00000545882 AATFQ9NY61 560 aaKnown RBP eCLIP17.45■□□□□ 0.38
CNN3-207ENST00000545882 LRP2BPQ9P2M1 347 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 DACH1Q9UI36 760 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 MYH8P13535 1937 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 TNKSO95271 1327 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 RTL9Q8NET4 1388 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 A0A1B0GTH6 734 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 MINDY4BA8MYZ0 360 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 ZRANB2O95218 330 aaKnown RBP eCLIP17.45■□□□□ 0.38
CNN3-207ENST00000545882 CYP7A1P22680 504 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 ERCC5P28715 1186 aaPredicted RBP17.45■□□□□ 0.38
CNN3-207ENST00000545882 CHRNDQ07001 517 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 KANK3Q6NY19 840 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 SH3RF1Q7Z6J0 888 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
CNN3-207ENST00000545882 SRRTQ9BXP5 876 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms