RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MBNL3Q9NUK0 354 aaKnown RBP8.56□□□□□ -1.04
SNHG1-224ENST00000545688 TJP2Q9UDY2 1190 aa8.56□□□□□ -1.04
SNHG1-224ENST00000545688 TPX2Q9ULW0 747 aaKnown RBP8.56□□□□□ -1.04
SNHG1-224ENST00000545688 RBAK-RBAKDNI3L0D1 243 aa8.55□□□□□ -1.04
SNHG1-224ENST00000545688 PGRP06401 933 aa8.55□□□□□ -1.04
SNHG1-224ENST00000545688 RNASE1P07998 156 aaKnown RBP8.55□□□□□ -1.04
SNHG1-224ENST00000545688 DPH2Q9BQC3 489 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-224ENST00000545688 JUNBP17275 347 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-224ENST00000545688 CLCN7P51798 805 aa8.54□□□□□ -1.04
SNHG1-224ENST00000545688 SFRP5Q5T4F7 317 aa8.54□□□□□ -1.04
SNHG1-224ENST00000545688 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
SNHG1-224ENST00000545688 ASB11Q8WXH4 323 aa8.54□□□□□ -1.04
SNHG1-224ENST00000545688 RC3H2Q9HBD1 1191 aaKnown RBP8.54□□□□□ -1.04
SNHG1-224ENST00000545688 PITPNM2Q9BZ72 1349 aa8.54□□□□□ -1.04
SNHG1-224ENST00000545688 PAPLNO95428 1278 aa8.53□□□□□ -1.04
SNHG1-224ENST00000545688 TXKP42681 527 aa8.53□□□□□ -1.04
SNHG1-224ENST00000545688 LMNB2Q03252 620 aa8.53□□□□□ -1.04
SNHG1-224ENST00000545688 IKZF1Q13422 519 aa8.53□□□□□ -1.04
SNHG1-224ENST00000545688 BNC2Q6ZN30 1099 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-224ENST00000545688 C22orf34Q6ZV56 151 aa8.53□□□□□ -1.04
SNHG1-224ENST00000545688 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
SNHG1-224ENST00000545688 TMEM87BQ96K49 555 aa8.53□□□□□ -1.04
SNHG1-224ENST00000545688 PF4P02776 101 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 ZNF865P0CJ78 1059 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-224ENST00000545688 PDE4BQ07343 736 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 CAMK2GQ13555 558 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-224ENST00000545688 CDH24Q86UP0 819 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 CCDC84Q86UT8 332 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-224ENST00000545688 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 MFSD4AQ8N468 514 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 LRRN4CLQ8ND94 238 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 ACSF2Q96CM8 615 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-224ENST00000545688 ASIC4Q96FT7 647 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 RHOVQ96L33 236 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 PRDM7Q9NQW5 492 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 CORINQ9Y5Q5 1042 aa8.52□□□□□ -1.05
SNHG1-224ENST00000545688 FAM155AB1AL88 458 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-224ENST00000545688 F13A1P00488 732 aa8.51□□□□□ -1.05
SNHG1-224ENST00000545688 GBP2P32456 591 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-224ENST00000545688 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
SNHG1-224ENST00000545688 SLC6A19Q695T7 634 aa8.51□□□□□ -1.05
SNHG1-224ENST00000545688 HSPA12BQ96MM6 686 aa8.51□□□□□ -1.05
SNHG1-224ENST00000545688 TMEM74Q96NL1 305 aa8.51□□□□□ -1.05
SNHG1-224ENST00000545688 GOLGA2P5Q9HBQ8 144 aa8.51□□□□□ -1.05
SNHG1-224ENST00000545688 CAPN6Q9Y6Q1 641 aa8.51□□□□□ -1.05
SNHG1-224ENST00000545688 FAM221AA4D161 298 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 CILPO75339 1184 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 CBX7O95931 251 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 ZP2Q05996 745 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 ZNF746Q6NUN9 644 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-224ENST00000545688 SLC23A3Q6PIS1 610 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 RELL1Q8IUW5 271 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 SEMA3GQ9NS98 782 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 ADAM30Q9UKF2 790 aa8.5□□□□□ -1.05
SNHG1-224ENST00000545688 BIN1O00499 593 aa8.49□□□□□ -1.05
SNHG1-224ENST00000545688 BPNT1O95861 308 aa8.49□□□□□ -1.05
SNHG1-224ENST00000545688 FAM160A1Q05DH4 1040 aa8.49□□□□□ -1.05
SNHG1-224ENST00000545688 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
SNHG1-224ENST00000545688 MCATQ8IVS2 390 aaKnown RBP8.49□□□□□ -1.05
SNHG1-224ENST00000545688 GATAD2BQ8WXI9 593 aa8.49□□□□□ -1.05
SNHG1-224ENST00000545688 ATP13A1Q9HD20 1204 aa8.49□□□□□ -1.05
SNHG1-224ENST00000545688 H3BS24 57 aa8.48□□□□□ -1.05
SNHG1-224ENST00000545688 PLCG1P19174 1290 aa8.48□□□□□ -1.05
SNHG1-224ENST00000545688 ITGAEP38570 1179 aa8.48□□□□□ -1.05
SNHG1-224ENST00000545688 ATG4DQ86TL0 474 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-224ENST00000545688 GIPC2Q8TF65 315 aa8.48□□□□□ -1.05
SNHG1-224ENST00000545688 ST14Q9Y5Y6 855 aa8.48□□□□□ -1.05
SNHG1-224ENST00000545688 MINDY4BA8MYZ0 360 aa8.47□□□□□ -1.05
SNHG1-224ENST00000545688 CYP7A1P22680 504 aa8.47□□□□□ -1.05
SNHG1-224ENST00000545688 PWP1Q13610 501 aa8.47□□□□□ -1.05
SNHG1-224ENST00000545688 DNAJB8Q8NHS0 232 aa8.47□□□□□ -1.05
SNHG1-224ENST00000545688 CARMIL2Q6F5E8 1435 aa8.46□□□□□ -1.05
SNHG1-224ENST00000545688 UPK3BL1B0FP48 263 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 UPK3BL2E5RIL1 263 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 SNAP47Q5SQN1 464 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 OGFOD2Q6N063 350 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 FAM13CQ8NE31 585 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 COX4I2Q96KJ9 171 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 CARS2Q9HA77 564 aaKnown RBP8.46□□□□□ -1.06
SNHG1-224ENST00000545688 COPRSQ9NQ92 184 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 KBTBD4Q9NVX7 518 aa8.46□□□□□ -1.06
SNHG1-224ENST00000545688 GRIN3BO60391 1043 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 GARTP22102 1010 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 ETV3P41162 512 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 KIR3DL1P43629 444 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 TNK2Q07912 1038 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 TMEM201Q5SNT2 666 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 LCE3BQ5TA77 95 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 ERMP1Q7Z2K6 904 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 GOLM1Q8NBJ4 401 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 FBXO27Q8NI29 283 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 LMCD1Q9NZU5 365 aa8.45□□□□□ -1.06
SNHG1-224ENST00000545688 POLR3KQ9Y2Y1 108 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-224ENST00000545688 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-224ENST00000545688 MRPL58Q14197 206 aaKnown RBP8.44□□□□□ -1.06
SNHG1-224ENST00000545688 ZNF326Q5BKZ1 582 aaKnown RBP8.44□□□□□ -1.06
SNHG1-224ENST00000545688 FLAD1Q8NFF5 587 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms